Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00504 ATGCTCTATTGTAGCAGTGATGACAATCCTTATCCATTTATAGGCCAGACACAGACAGATAGAGATCACCAAATGTTTAAGAATGACCAGCAAACTGTGCAACCCTATCATTCCCATCTTCCAGACCCTTTTTTTGAAGATGATGACCTATTTTTGAATTACTTAACTCATCATCACCTGTTGGCTGGTACTACTTCCCAAGATCCCACTGAGATTAGCATTGACGTTTCGAATATTGCAGCTGACACAAATAATGAGAGTACCAATGATAATGAGGTTGAGAGGGATACTTCCGTGAAATCAAGTTCAAAAAAAAGGGGGACAACAGTGAAACAAACAATACCAAGGAATAAGAGTGGGAAGAAGGACAGACACAGCAAAATCTGTACAGCTCAAGGGACAAGAGATCGCAGAATGAGACTTTCTCTTCCTATTGCTCGTAAGTTTTTTGATCTTCAAGACCTGTTAGGATTTGACAAAGCGAGCAAAACCATCGAGTGGCTCTTTAGCAAGTCAAGGTCAGCAATTAAAGAACTTGAACAAAATATCTCAAAAATGAAGCAATACACCATAGTTGCTGCTAAGAGTTTATCATCAACAACTGAGAGTGAAGTTGTTTCTAGGGTTGGGGAGGCTTCTGAAAGTAGTGGATTCAAGAAATGCACAGAGGAGAAATTCGCTGGGTGCGTGAAGGAGAAAAAGAGCAGAAAGCTGCACACAGTTGCAAAGGAATCGAGGGACATGGCGAGAGCTAGGGCAAGAGTGAGAGCGAGGGAAAAGATGATTTTGAAAGGGGTGGAAGTATCATCAAAAGAAGGATCCAAAGTGACGCCTTCTGGGGAAACATATATTAGCAACCAAGGAATGAGTGTCACGCTGAAAGAAATTCCCGCAAGAGACGAAGAAGCCAAAAACCATGGCTTCCTAGAACATTATATGAATTCTGTCAACATAAATGAGAACGATTTGCATCGTTTTTCATCACAGTCGTCTGCTGTGAAGATTTCACACGATGAAGGTCCAAGTGGAGGGAATAACGAGGATGATTTTTTTCAAAGTTTTACTCGGAATTGGGAGATTGAGTTTAACCATGTGGAAATGCAGTCCCCTTACTGCCCAGTACCACAGATGAAGACGCTGCTAGCCGCTGATGTCGAGGGACAAATCCTTAATGAAGTTATTGATCATTTCAAGTTACAGACTAGCCAAGCCTATCTCCCTTTGTAA 1227 0.4156 MLYCSSDDNPYPFIGQTQTDRDHQMFKNDQQTVQPYHSHLPDPFFEDDDLFLNYLTHHHLLAGTTSQDPTEISIDVSNIAADTNNESTNDNEVERDTSVKSSSKKRGTTVKQTIPRNKSGKKDRHSKICTAQGTRDRRMRLSLPIARKFFDLQDLLGFDKASKTIEWLFSKSRSAIKELEQNISKMKQYTIVAAKSLSSTTESEVVSRVGEASESSGFKKCTEEKFAGCVKEKKSRKLHTVAKESRDMARARARVRAREKMILKGVEVSSKEGSKVTPSGETYISNQGMSVTLKEIPARDEEAKNHGFLEHYMNSVNINENDLHRFSSQSSAVKISHDEGPSGGNNEDDFFQSFTRNWEIEFNHVEMQSPYCPVPQMKTLLAADVEGQILNEVIDHFKLQTSQAYLPL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00504 408 ProSiteProfiles R domain profile. 243 260 IPR017888 -
Pte11g00504 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 81 348 IPR005333 GO:0003700
Pte11g00504 408 Pfam TCP family transcription factor 120 261 IPR017887 -
Pte11g00504 408 ProSiteProfiles TCP domain profile. 121 179 IPR017887 -
Pte11g00504 408 MobiDBLite consensus disorder prediction 116 133 - -
Pte11g00504 408 MobiDBLite consensus disorder prediction 79 133 - -
Pte11g00504 408 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00504 Pte-Chr11 4986036 4987599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00504 107 184 TCP Transcription Factor Family AT1G68800 69.231 1.74e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte11g00504 TCP 1.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00504 - - qsu:112041196 235.728