Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00502 ATGTTGATTCAGAGGAGGATCATGAGCTGGAGGAGGGTGGCCAAGGCTTTGCAAGCTCTAGCGGCTCATAGTTTGCTCTTCTCATTTACGCTACTGATGGTTCTCAAGCTAGACCATGCCATTCATTACTCATGGTGGATTGTTTTTTGCCCCTTGTGGCTTTTCCATGCAGTAACAGCACGTGGTCGGTTTTCCATGCCTGCTCCTGCAATGCCTCATGATCGCCATTGGGCACCGTGTCATGCTGTCATGGCAACACCATTAATCATTGCTTTTGAGCTGCTTCTATGCACTCATCTTGAGAGTACACATGTGGTTGATTTGAAGATTGTGTTCCTGCCTCTTTTGGCATTCGAACTAGCAATTTTGATTGACAACGTCAGAATGTGTCGGGCTTTAATGCCCGGGGATGAAGAAAATATGAGCGACGAAGCTATATGGGAGACCCTTCCTCACTTTTGGGTTGCGATATCCATGGTTTTCTTCATTGCTGCCACAACATTCACTCTTCTAAAGATATGCGGTGATATAGCTGCTTTAAGTTGGTGGGACTTATTTATTAACTATTGCATCGCAGAGTGCTTTTCCTTCCTTGTTTGCACAAGATGGTATAATCCAAAAATTCACGGACACTCTCACGTTAGAGATGCTACTACATCATCATTTAGCATAAGATATATGGAATGGGACATAACATTAGTACAAGAGGATGAGCGCCGGCAAGTGAGACTATGCAGTCTGCAAGACATTGGTGGCCATATAATGAAATTACCTTTTATTGCTTTTCAGATTGTGCTATTCATGCATTTGGAGGGGACCCCATCTGGTGCCAGGCACATTCCTTATGTTGCAATTTTTTCTCCAATTTTTCTACTGCAAGGTGCTGGTGTTTTATTTGCCGCATACAAATTGGTGGAGAGAACTATTCTCTTAGTAAATGATGAAGCTTTTTCTGGAAGCTACCGTGCTGCAGCATCAAAAGTTCGTGAATGCTTTGGATTCTTGCATCATGGCCCAAGATTGCTGGGTTGGTGGTCAATTGATGAAGGAAGCCAAGAGGAACAAGCTAGACTTTTTTGTGCTTCGAGTTCTGGGTATAATACTTTCTCACCTGATGCTGTGAAGAAAATGCCACGAGATGATCTCGTTAACGAGATTTGGAGGTTGCAAGCTGCACTTGGTGAGCAAGCAGAAGTCACAAAACATAGCCAGCAGGAGTATGAAAAACTTCAAAACGAGAAAATCTTATGTAGAGTTTGCTTTGAAGAACAAATCAACCTGGTGCTACTTCCATGTAGGCATCACGTCATTTGCAGGGTTTTCTATGTGATTTACAAAAGTGCCCTCAAGTGGGTCTTAGTGCAAAGTGACCTAAAAGGAAAAAGGAAGACTAAAAAGCCTCCTGGACGTTTTGCGCGCGCGTTCTGTGACAACCAAAAAGTCGACCAAGACGTGACCACGTCAAGTGATCACGCTTCAGCAGGACTTCTTCGATGGCTCGATCATACGCGTGACCACGCTGAGTAA 1527 0.4388 MLIQRRIMSWRRVAKALQALAAHSLLFSFTLLMVLKLDHAIHYSWWIVFCPLWLFHAVTARGRFSMPAPAMPHDRHWAPCHAVMATPLIIAFELLLCTHLESTHVVDLKIVFLPLLAFELAILIDNVRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATTFTLLKICGDIAALSWWDLFINYCIAECFSFLVCTRWYNPKIHGHSHVRDATTSSFSIRYMEWDITLVQEDERRQVRLCSLQDIGGHIMKLPFIAFQIVLFMHLEGTPSGARHIPYVAIFSPIFLLQGAGVLFAAYKLVERTILLVNDEAFSGSYRAAASKVRECFGFLHHGPRLLGWWSIDEGSQEEQARLFCASSSGYNTFSPDAVKKMPRDDLVNEIWRLQAALGEQAEVTKHSQQEYEKLQNEKILCRVCFEEQINLVLLPCRHHVICRVFYVIYKSALKWVLVQSDLKGKRKTKKPPGRFARAFCDNQKVDQDVTTSSDHASAGLLRWLDHTRDHAE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00502 508 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 446 IPR013083 -
Pte11g00502 508 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 440 - -
Pte11g00502 508 Pfam Transmembrane Fragile-X-F protein 35 292 IPR019396 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00502 Pte-Chr11 4956327 4966569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00502 8 439 C3H Transcription Factor Family AT1G73950 62.273 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00502 - - qsa:O6P43_032794 724.546