Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00497 ATGACTGGACCATCATGGTTGGTGGACCCAAAAAGAATTGCTACCAAAATCAAGACCGCTACTGGAACACATGAACATAGCAAAGTGCAATGGAAAAGCAATCCGACTAGATCTTGTCCAAATTGCGAATATATAATCGACAACAGTGATGTTGTCCATGAGTGGCCTGGTTTACCAAGAGGTGTAAAGTTTGATCCTTCTGACCAAGAGATAATAGAACACTTGCTTCGTAAGGTCGGTGATGGGAATTTAAAACCCCATCCTTTCATTAATGAGTTCATCCTTACTCTTGAGGGGGATGATGGAATATGTTACACCCACCCTCAAAATTTACCAGGTGTGAAACAAGATGGGAGTGTTTCCCACTTTTTTCATAGAGCAATCAAGGCTTACAATACTGGAACGCGCAAGCGTAGAAAAATACATGGTGAAGATTTTGGTGATGTCCGCTGGCATAAGACTGGAAGAACTAAACCTGTAATATTGGATGGATTTCAGAAAGGCTGTAAAAAGATTATGGTTCTCTACATGACCCTGGTTAGGGGAGGTAAAACAGAGAAAACCAATTGGGTAATGCATCAGTATCACCTTGGAACTGAGGAGGATGAGAAGGATGGGGAGTATGTCATTTCGAAAGTGTTTTACCAGCAGCAACCAATCATCAAAGGGAGTGATAAAAATGATGGTGGGAGTCCTGAAGCTGCTGAAGCATCCATAGTGAAAGTTGATCCAGTTACCCCTAAATCTGTAACTCCTGATCCTCCTCGCTCAGAAAAGCAATCTTCAGATTTTGAACTGGTACAGGAGCCAAATGTATCCACTGGTCCCATATATCAGCATCTTGTTACGGAGTATGTTGAAGATGACATACAGGCTGATGTTGAGGGGCCTGCACAACCTGATCAACAAAATGTTGAAAACCATCCGAATGAATTGATGGATGATAATGACAACCAAGCACAGGAAGAGTCAAAGTGGTGGGATAGTGAATCGCAACACTTGCTAGACTCTCAACAGCTTGTTGAGGCATTGTCTTTGTGTGATGACCTTCTTCAAAGCCAATCTCCTGATAGAGATGACAATGGGAATGATAGAGCCTTTGATGCCAAACCCCGTCTTTCTGACTATGCAAAGCTAGGGCCAGAGCACCTGAAAATGGATATTGAAGACTGTCAAAAGATTGAGCTTGACCCTGCAAACATTGAACTTGATACTCCACCAGAGTTCCGACTTAGCCAGCTGGAATTTGGGTCCCAGGATAGTTTTCTTGCTTGGGGCAGTAGCAAGTTAGGTGACTGA 1299 0.4296 MTGPSWLVDPKRIATKIKTATGTHEHSKVQWKSNPTRSCPNCEYIIDNSDVVHEWPGLPRGVKFDPSDQEIIEHLLRKVGDGNLKPHPFINEFILTLEGDDGICYTHPQNLPGVKQDGSVSHFFHRAIKAYNTGTRKRRKIHGEDFGDVRWHKTGRTKPVILDGFQKGCKKIMVLYMTLVRGGKTEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQPIIKGSDKNDGGSPEAAEASIVKVDPVTPKSVTPDPPRSEKQSSDFELVQEPNVSTGPIYQHLVTEYVEDDIQADVEGPAQPDQQNVENHPNELMDDNDNQAQEESKWWDSESQHLLDSQQLVEALSLCDDLLQSQSPDRDDNGNDRAFDAKPRLSDYAKLGPEHLKMDIEDCQKIELDPANIELDTPPEFRLSQLEFGSQDSFLAWGSSKLGD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00497 432 Gene3D NAC domain 67 220 IPR036093 GO:0003677|GO:0006355
Pte11g00497 432 FunFam NAC domain-containing protein 8 67 220 - -
Pte11g00497 432 MobiDBLite consensus disorder prediction 352 374 - -
Pte11g00497 432 MobiDBLite consensus disorder prediction 353 374 - -
Pte11g00497 432 MobiDBLite consensus disorder prediction 308 326 - -
Pte11g00497 432 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Pte11g00497 432 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Pte11g00497 432 MobiDBLite consensus disorder prediction 295 326 - -
Pte11g00497 432 MobiDBLite consensus disorder prediction 221 272 - -
Pte11g00497 432 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Pte11g00497 432 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 391 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00497 Pte-Chr11 4897285 4901519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00497 37 238 NAC Transcription Factor Family AT4G28500 55.825 2.18e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte11g00497 NAM 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00497 - - jre:108993283 638.262