Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte11g00491 | ATGTGGGGACATGGCTCACAGTACAGGAAAGGACCTGAATCTTTGAGAGGGACAAAGCCAGCATCGTCCATGATGAGGCTGCCATGTTATTGTTGTGCTGAGGGGTGCAAGAACAACATAGATCATCCAAGGTCGAGACCTCTCAAGGATTTCAGGACACTGCAGACTCACTATAAGAGAAAGCATGGCGCTAAGCCATTTGGTTGCAGAAAATGTGGAAAGCCATTTGCAGTAAGAGGAGATTGGAGAACGCATGAGAAGAATTGCGGGAAGCTCTGGTTTTGTATCTGTGGTTCTGATTTTAAACACAAGAGATCTCTTAAAGACCATGTACGTGCATTTGGTGATGGCCATGCTGCGCATACTGTAGAAATGTGCAACCAATTCGAAGAAGGAGAAGACGAAGAGGATGAAGATGGTGAAGACAATGAAGTAGCTCTAGTTTATGGAACTCCATCTGGTCGTATGTCTGCTTATTTTTAA | 483 | 0.4451 | MWGHGSQYRKGPESLRGTKPASSMMRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAAHTVEMCNQFEEGEDEEDEDGEDNEVALVYGTPSGRMSAYF* | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte11g00491 | 160 | Gene3D | Classic Zinc Finger | 63 | 128 | - | - | |
Pte11g00491 | 160 | PANTHER | ZINC FINGER PROTEIN WIP2 | 1 | 138 | IPR043584 | GO:0003700|GO:0010468 | |
Pte11g00491 | 160 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pte11g00491 | 160 | SUPERFAMILY | beta-beta-alpha zinc fingers | 52 | 87 | IPR036236 | - | |
Pte11g00491 | 160 | FunFam | Zinc finger protein WIP2 | 36 | 118 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte11g00491 | Pte-Chr11 | 4848962 | 4849444 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte11g00491 | 1 | 124 | C2H2 Transcription Factor Family | AT1G13290 | 91.200 | 5.68e-83 | 244 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pte11g00491 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte11g00491 | - | - | qsa:O6P43_025679 | 296.975 |