Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00474 ATGGCTTCAACGAGAACAGGGTGTGTGGATACAGAGCAGCCCTTCGTGTATACGAAAGGGACCACCATAACTGCACCATTGACGAACGGGCAAATAGAGAATTGGGGTGATTCAGGTATGGCAGACCATAACCAGCAGACCGATACTTCGACAGATGTTGACAACGATGACAAACATCAATTCAATATGGTACACCCTGGCGCACTTGTAGCTGTAGACTCTATGGACCAATCAAGAGAAAAATCTGGCGATCAAAAGGCGTTACGTAGGCTGGCTCAGAATCGAGAAGCTGCAAGGAAGAGTAGGCTAAGGAAAAAGGCCTATGTTCAACAACTTGAGAGTAGTCGACTTAGGCTGGCTCAACTTGAGCAAGAGTTGCAACGTGCCCGTCAGCAGCAGGGTATATTAATCTCCAATGGACTTCCTAGTGATCCTTGTCACTCAAATGCTGGAAATGGTGCCCTGGCATTCGATTTGGATTATGCACGATGGCTGGATGAGCATCAGCATCTTATGATTGATCTTCGAGCAGCTATCAATTCCCAAATGAGTGATAATGACTTGCGTTTTCTGGTTGACGGGGTGATGGCACATTATGATGAAATATTCCGGCTCAAGAGTCTTGGCACTAAAGCTGATGTGTTTCACATGCTTTCTGGGATGTGGAAGACTCCCGTAGAAAGGTGTTTCATGTGGCTCGGCGGTTTTCGTTCATCTGAACTTCTTAAGATACTTGGCAGCCATCTTGAACCATTAACAGAACAACAATTGATGGGCGTGTGTAATCTGCAGCAATCCTCACAGCAGGCTGAGGATGCATTGTCTCAAGGAATGGAAGCTTTGCAAATATCTCTATTAGAGACTCTTTCATCAAACACCTTAGGCCCTGCATGTACTGGAAATGTTGCTGATTACATGGGCCAAATGGCACTTGCAATGAGTAAATTTTCCACATTAGAGAACTTCGTCCATCAGGCTGACCTTTTGAGGCAACAGACACTGCAGCAGATGCATCGAATTTTGACGACACGTCAAGCAGCCCGCGCCCTACTTGTTATAAATGATTATGTCTCACGCCTTAGAGCACTTAGTTCTTTATGGTTGGCTCGGCCTAAGGAGTGA 1122 0.4581 MASTRTGCVDTEQPFVYTKGTTITAPLTNGQIENWGDSGMADHNQQTDTSTDVDNDDKHQFNMVHPGALVAVDSMDQSREKSGDQKALRRLAQNREAARKSRLRKKAYVQQLESSRLRLAQLEQELQRARQQQGILISNGLPSDPCHSNAGNGALAFDLDYARWLDEHQHLMIDLRAAINSQMSDNDLRFLVDGVMAHYDEIFRLKSLGTKADVFHMLSGMWKTPVERCFMWLGGFRSSELLKILGSHLEPLTEQQLMGVCNLQQSSQQAEDALSQGMEALQISLLETLSSNTLGPACTGNVADYMGQMALAMSKFSTLENFVHQADLLRQQTLQQMHRILTTRQAARALLVINDYVSRLRALSSLWLARPKE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00474 373 SMART brlzneu 82 135 IPR004827 GO:0003700|GO:0006355
Pte11g00474 373 ProSiteProfiles DOG1 domain profile. 154 370 IPR025422 GO:0006351|GO:0043565
Pte11g00474 373 SUPERFAMILY Leucine zipper domain 86 129 IPR046347 GO:0003700|GO:0006355
Pte11g00474 373 FunFam BZIP family transcription factor 85 135 - -
Pte11g00474 373 Coils Coil 105 139 - -
Pte11g00474 373 Pfam bZIP transcription factor 86 125 IPR004827 GO:0003700|GO:0006355
Pte11g00474 373 Pfam Seed dormancy control 172 245 IPR025422 GO:0006351|GO:0043565
Pte11g00474 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Pte11g00474 373 Gene3D - 85 137 - -
Pte11g00474 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 128 IPR004827 GO:0003700|GO:0006355
Pte11g00474 373 PANTHER TRANSCRIPTION FACTOR TGA9 33 372 - -
Pte11g00474 373 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00474 Pte-Chr11 4683735 4687105 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00474 8 374 bZIP Transcription Factor Family AT1G68640 69.919 1.03e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte11g00474 DOG1 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00474 K14431 - qsa:O6P43_032773 555.829