Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00473 ATGGCTACAGATCGTAAACATCGTCGGGCATCTTCTTCCGACGAGACGGAGAGGTCTTCGAAACGTGACAAACACCGCCGCCACAGCCGCCACCACCACAGGCATCGTCATGGTAGGAACAAGCACGAAGAAGAAACTAATCATGAAAACGAGATTCAATCAGCTGCTGAACAAATTCCTTCACCTGCTGCTCGTAATTCTGAAACTCTCAGTCGCCGACAGAATGACGATGTCGAAGAGGGAGAGATTCTCGAGGAAGATGGTTTGTCCGGTGAGATTGAGAAGAAGGTAGGCAATTCTGGTTCTATTTCTGATTCTGGTGAATTGGAGGGGGCTGGATCCAAACTTCAATCTGACAAACTTAATCTGGAACAACTTGTCGAAGAAATTCCTTCTGGTCATATGAATGAGAGTGTTCGAACTAGTGCATGTAATTCAAGAACAAAAGGATATGATGCAAGCAATTTGGAATTAGCAACTAATGTAGGCTATGATGGAAAAGAAAAGGGTTCATGGAAAGACTCTATGGATGAACTAGCTGTTCATTTTGGCTGTTATGACGTGGCCCATGACCATGTGGATCACAAAGCTTTTCATCGGCTCCAAAAAGAATATGATGAGGATGAACTGGATATTGATAAAAGCAAATCAATTGTTTATAGGTACTCATCATCTGAAAGCACTGGAGATAGACGCAATACCTTAGGATCACACCACAAATACCATGATGGATATGTATATAGGAGTCCTGCTAGATCAAGGAGTCACACTAGAGAAAGATCTCTTTCACATAGCATGGTAGAGGAAGATTCTCGTGGTAGAAAAAGGTCAACTGAAGAAGGGGACAACGATATTTATGCTGAAAAACGAAAGACCAAGTATGGATTGGATGATGGCATTAGAGAATCACGACATCGAAGCAGGAATACAGAAGAAATCAGTGCTAGTTTTAGCTGTAGATATCATGTCGCGGAGGATAGACATAGAAGTAGGGAAAGAAGTGACAGAGATAGAAGTATTGATGGTGATAAGGACTCGGGGAGGCGAAGGAATAGAGAAAGAAGTACAGAGATGGACATAGACAGGGCTCTTAGGAGGGATAGAGAAAGAGGAAGGAGTAAAGATGTGGATGTTGACCATGGCCATCATAGGAAAAGGGACCAAGAAAGGGGCCTGGAAAAGGGAAGGATGATTGATGAAGATCGAGGTCGGAGCAGGGAAAGGGAAGTGGATATGGACTGGAGAAGAGACAATGGTAGAGGTAGGAGCAGGGACACTGAGAGGGATAAGGGAAGGGACACAGAGAGGTATAGCAGAAGGGACAAGGAGAGGGATAGGAGCAGGGATGCCCGGATAGACAGAGATAGAAGGGAAAAGGAGAGAAATAGGATCAGGGAGAGAGATAGAGATGCCTGGAGAGGTGGAGATAGGGAGAGGGAAAGGGATGAAAGGGACCTGTACAGAGAGATAGCTAGGGAGAGGGAGATGAATAGTAGCAAAAACTCTCAGAATTCAAAACTTGATGAAACCAAATACCTCCAGGACAGGAAAAGGTACCCTGAGGCAGAAAAGGCTCATAATTTCTCAAGCATGTCGTTTGAAGAGAGTGAGGACAAACAGAAGAGAGAGGAGGTTGAACAAAAAGACTTTGACGAAAATGTTGCTTTGAAGTTTTCTGATCAAGAGGAGGATGACCTGAACAGAATCAAAGAGGAAAGTAGAAGGCGTAGGGAGGCAATTTTAGAAAAATATAAGATGCAGAGATTGCAGCAACCAACCGTCATCCATTCCCAGGATTTAGAAAAAGATACGGGACCTGCTGCTGATGGCGGTGCAAGTCCAGAAAATTTGGACGATAGGGTTGATAATGCTGATGTCTGTGTTGAGGAGGCATCGTTTTCTGTTGGAAAGTCACCTCCTCAGAATGGAAATGCTGTTCCTGGGAGATCTTCTGGTGCTGGGGGCCTGGGAGAGGGTACTCCAAAGAGTGAGCGATCAGATGATGAATTCTGTGATGATATATTTGGCGAGACTCCAACTGGAGTTCGAAAATTGGGTACAGAAAAGGGAATGAGAATTGAGAGGAGTGGCCTTAATGACAATTGGGATGATGCTGAGGGGTATTATGGGTACAGATTTGGTGAAATATTAGATGGTCGATATGAAGTAACTGCAGCCCATGGGAAAGGGGTTTTCTCAACAGTTGTTCGAGCCAGGAATCTTAGGCCTGGAAATGGTGAACCAGACGAGGTTGCCATAAAAATTATACGTAATAATGACACTATGTACAAGGCTGGAATGGATGAGTTGGTAATATTGAAGAAATTAGTAGGTGCTGATCCAGATAACAAGCGACACTGTGTTCGTTTCCTTTCAAGTTTTAAGTACCGGAATCATCTTTGTTTAGTTTTCGAATCTCTTCAAATGAATTTGCGTGAGGTTTTAAAAAAATTTGGCCGCAATATTGGCCTTAGGCTTACTGCTGTGAGAGCATATGCAAAGCAACTCTTTATTGCGCTGAAGCATCTTAGGAACTGTGGTGTTCTTCACTGTGATATAAAGCCAGACAACATGTTGGTGAATGAAGCCAAAAATGTCTTGAAGCTCTGTGACTTTGGTAATGCCATGTTTTCCGGTAAGAATGAAGTCACTCCATATCTTGTGAGCCGCTTTTATCGTGCTCCTGAAATAATTTTAGGCATGCAGTATGATCATCCATTGGATATATGGTCTGTTGGTTGTTGCTTGTATGAGCTTTACACTGGGAAAGTTCTTTTTCCGGGTCCTACGAACAATGACATGCTTAGGCTTCACATGGAACTAAAGGGAACTTTCCCAAAAAAGATGCTTCGGAAGGGCGCATTCACTCAAGAGCATTTTGATCAGGACTTGAATTTTCATGCAACAGAAGAGGATCGCGTAACAAAAAAGATTATTAAGCGTTTGATTCTGAACATCAAGCCAAAGGATATTGGATCAATCGTTTCTGGCTCTCCTGGTGAGGACCCCAAGATGTTGCTCAATTTCAAAGATCTGCTAGATAAGGTTTTTATACTAGATCCGGACAAGAGATTGACAGTTTCTCAGGCATTGAACCATCCATTCATCACGGGCAAGTGA 3120 0.4324 MATDRKHRRASSSDETERSSKRDKHRRHSRHHHRHRHGRNKHEEETNHENEIQSAAEQIPSPAARNSETLSRRQNDDVEEGEILEEDGLSGEIEKKVGNSGSISDSGELEGAGSKLQSDKLNLEQLVEEIPSGHMNESVRTSACNSRTKGYDASNLELATNVGYDGKEKGSWKDSMDELAVHFGCYDVAHDHVDHKAFHRLQKEYDEDELDIDKSKSIVYRYSSSESTGDRRNTLGSHHKYHDGYVYRSPARSRSHTRERSLSHSMVEEDSRGRKRSTEEGDNDIYAEKRKTKYGLDDGIRESRHRSRNTEEISASFSCRYHVAEDRHRSRERSDRDRSIDGDKDSGRRRNRERSTEMDIDRALRRDRERGRSKDVDVDHGHHRKRDQERGLEKGRMIDEDRGRSREREVDMDWRRDNGRGRSRDTERDKGRDTERYSRRDKERDRSRDARIDRDRREKERNRIRERDRDAWRGGDRERERDERDLYREIAREREMNSSKNSQNSKLDETKYLQDRKRYPEAEKAHNFSSMSFEESEDKQKREEVEQKDFDENVALKFSDQEEDDLNRIKEESRRRREAILEKYKMQRLQQPTVIHSQDLEKDTGPAADGGASPENLDDRVDNADVCVEEASFSVGKSPPQNGNAVPGRSSGAGGLGEGTPKSERSDDEFCDDIFGETPTGVRKLGTEKGMRIERSGLNDNWDDAEGYYGYRFGEILDGRYEVTAAHGKGVFSTVVRARNLRPGNGEPDEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDNKRHCVRFLSSFKYRNHLCLVFESLQMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFSGKNEVTPYLVSRFYRAPEIILGMQYDHPLDIWSVGCCLYELYTGKVLFPGPTNNDMLRLHMELKGTFPKKMLRKGAFTQEHFDQDLNFHATEEDRVTKKIIKRLILNIKPKDIGSIVSGSPGEDPKMLLNFKDLLDKVFILDPDKRLTVSQALNHPFITGK* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00473 1039 Gene3D Transferase(Phosphotransferase) domain 1 781 1037 - -
Pte11g00473 1039 SUPERFAMILY Protein kinase-like (PK-like) 708 1038 IPR011009 -
Pte11g00473 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Pte11g00473 1039 CDD STKc_PRP4 720 1036 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pte11g00473 1039 MobiDBLite consensus disorder prediction 594 620 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 324 559 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 509 559 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 52 69 - -
Pte11g00473 1039 FunFam serine/threonine-protein kinase PRP4 homolog 691 780 - -
Pte11g00473 1039 Pfam Protein kinase domain 723 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00473 1039 PANTHER DUAL SPECIFICITY PROTEIN KINASE 397 1037 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 632 669 - -
Pte11g00473 1039 Gene3D Phosphorylase Kinase; domain 1 691 780 - -
Pte11g00473 1039 SMART serkin_6 721 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00473 1039 MobiDBLite consensus disorder prediction 1 117 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 23 39 - -
Pte11g00473 1039 ProSiteProfiles Protein kinase domain profile. 721 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00473 1039 MobiDBLite consensus disorder prediction 324 496 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 1 22 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 222 288 - -
Pte11g00473 1039 FunFam Serine/threonine-protein kinase PRP4 homolog 781 1037 - -
Pte11g00473 1039 MobiDBLite consensus disorder prediction 232 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00473 Pte-Chr11 4670179 4676412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00473 709 1036 MAP Kinase Gene Family AT2G43790 31.503 6.66e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pte11g00473 Pkinase 1.4e-46 CL0016