Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00471 ATGGAAAATGAAAACTCAAAAGCTGTAAGGAAGATCGGTCAATCCACAAAGGAGTTTTTATGGTTAGGTTCTTCATCAACGTGCAGGAAGAAGCGCAGTCACTATCAGGCCTTTCAGCGCAATGGTGTTATGATATCTGTTCATGATTTTGTGTATGTTTTAGCAGAGGAGCACAAGCGTCTCGTTGCATATTTGGAAGACCTTTACGAGGATTCCAGAGGCAACAAGATGGCAGTGGTATGCTGGTTCCACAAAGTAGATGAGGTTGGTATTACTTTACGTCACAGTTATAATGACAGAGAGATTTTCTTTTCTCTTTGTCTTCAAGAACTGAGTATTGAATGCATAGATGGAATTGCCACTGTCCTCAGCCCTCAAGATTTCAGAAAATTTCAGAATGAATCATCCCACACTTCGCTGAAACCTTTCTTTTGCAAGCATCAGTTTGAGAATGATGAAATAAAACCCTTTGATATTACTCGAGTTGAAGGTTACTGGAGACAGGCAATAGTCAGACACTTCTATAAACGTAGTGATTCAAAGTCTTCTAGGAGTTCTTACCAATTTGCTTCTACCGTGAAAGCTGATGAAGAACACAAATTTTCAGTTGAACTCAGACCTAGGAAGAGACCTCGCTTGTCCAGGGCAGATGTTAAATGTATTGTAGGTGGAGCTGATTCTAATTTGCAAAATCCAAGCAACAGTGGCGTCGATGTTAAAGTGGTTTCCTCAATTGCTTCAAAGCAAAATTGTGCTGTCTCGCCATCTTCAACCAAAGACACTTGTCAGAATGTGTTTTTAAAAGTTTCTTGCCCAGTTGAAGTCCTTTCTCAAGACAGTGGAATCAGAGGATGTTGGTTCAGAGCTATGATTATGAAGATACGCGGAAATAAAGTGAAGGTGCAATACCAAGACCTCGTAGATGCAGATGATGAAGCCAAAAAACTTGAGGAATGGATCTTAGCTTCTAAGGTTGCGGTACCTGATGATCTGGGTATTCGGGTGCATGGAAGGAGGAGAGTCCGTCCTGCTCTACAGTATAATCAAGACATAATTCTTTCAAATTTTGCAGTGGGTTCAATTGTTGATGTGTGGTGGCACGATGGGTGGTGGGAAGGCATTATAGTCAATAAAGGAGATGGAGATAAGTTTCATGTATATTTTTCTGGTGAGAAGCAGGTATCCACTTTTGGAATCGACCACTTGAGACACTCTCAAGAATGGACCGGAAATGAGTGGACACTATTAACCCCCCGGCCTGAAGTTGTGGCATCTATATTATGTAGTTTAGAAAGGAACCAAGTTGCTTGCAAAGCATTTCAGTTGCCCATCCGTGAAGATGTCCTGGCAAATAAAACCTTAGCCAGGAGTAAAGATTCCTGTTTGGGGGATGCTCAAGGGATTTGTAATTCCAAAGAGTTAGGGCTGCTGCAAGAACTGGCAAAAGATGAGCGATTTGCCCAATTGAGGTGGAAGACTTCAAGGAAGAGGAAGTCTACAAGTGGTTCTCTTCGTAAAAGAAGTAATCCTAGTCACAGTAGGAAGTCCCCCAACGTTTTTGAATCCCATGGGTCAAAGAAATTTGTGGTTCCTTCATCAGTTAAGGTTGATCATGAGGACTGCAAATACGGCAGAGGTTCTTCAATTTTGAGCCCTTGCTCCAACTTGGTTATGTGTAGGTGA 1683 0.4177 MENENSKAVRKIGQSTKEFLWLGSSSTCRKKRSHYQAFQRNGVMISVHDFVYVLAEEHKRLVAYLEDLYEDSRGNKMAVVCWFHKVDEVGITLRHSYNDREIFFSLCLQELSIECIDGIATVLSPQDFRKFQNESSHTSLKPFFCKHQFENDEIKPFDITRVEGYWRQAIVRHFYKRSDSKSSRSSYQFASTVKADEEHKFSVELRPRKRPRLSRADVKCIVGGADSNLQNPSNSGVDVKVVSSIASKQNCAVSPSSTKDTCQNVFLKVSCPVEVLSQDSGIRGCWFRAMIMKIRGNKVKVQYQDLVDADDEAKKLEEWILASKVAVPDDLGIRVHGRRRVRPALQYNQDIILSNFAVGSIVDVWWHDGWWEGIIVNKGDGDKFHVYFSGEKQVSTFGIDHLRHSQEWTGNEWTLLTPRPEVVASILCSLERNQVACKAFQLPIREDVLANKTLARSKDSCLGDAQGICNSKELGLLQELAKDERFAQLRWKTSRKRKSTSGSLRKRSNPSHSRKSPNVFESHGSKKFVVPSSVKVDHEDCKYGRGSSILSPCSNLVMCR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00471 560 MobiDBLite consensus disorder prediction 492 522 - -
Pte11g00471 560 MobiDBLite consensus disorder prediction 492 512 - -
Pte11g00471 560 Pfam Agenet domain 272 344 IPR008395 -
Pte11g00471 560 CDD Tudor_Agenet_AtDUF_rpt1_3 267 325 - -
Pte11g00471 560 Pfam BAH domain 43 151 IPR001025 GO:0003682
Pte11g00471 560 SMART BAH_4 43 160 IPR001025 GO:0003682
Pte11g00471 560 ProSiteProfiles BAH domain profile. 43 160 IPR001025 GO:0003682
Pte11g00471 560 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 261 522 - -
Pte11g00471 560 SMART agenet_At_2 354 410 IPR014002 -
Pte11g00471 560 SMART agenet_At_2 265 331 IPR014002 -
Pte11g00471 560 Gene3D - 14 159 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00471 Pte-Chr11 4660053 4662851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00471 277 414 PHD Transcription Factor Family AT5G58610 26.950 4.90e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00471 - - qsa:O6P43_032763 558.91