Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00458 ATGGCAGACCAGGTAACCAAGGCTGCAGATGGTGCTGTGTCCTTTAAACAAGATTGCTTAGAACTCAAGACCAAGACAGAAAAGCTTGCCGGACTCCTCCGTCAAGCTGCCAGAGCCAGCGGCGATCTATACGAGCGTCCGACCAAGCGTATCATTGATGATACAGAACAAGTCCTTGACAAAGCTCTCACACTCGTTACGAAATGTCGTGCAAACGGCATGAGAAGACTTTTCACCATTATACCAACTGCGGCTTTTCGCAAAACGTCGACGCAGCTTGAGAATTCAGTAGGAGATTTGCAATGGCTTCTTAGAGTTTCGGCACCAGCGGAAGAACGCGATGATGAGTATCTTGGTTTGCCTCCTATAGCTGCCAATGAGCCTATTCTGTGTCTCATATGGGAACAGATCGCCATATTGCTTTCGGCAGATTCATTGGAGGAGCGTTCGGATGCTGCTGCTTCGTTGGTTTCATTGGCAAGGGACAACGATCGGTACGGTAGATTGATTGTCGAGGAAGGAGGGGTGCCACCCCTTCTGAGATTATTGAAGGAAGGACAAACAGAAGGTCAGGAGAATGCAGCTAGGGCAATTGGTCTGCTTGCACGAGACCCGGAAAGCGTCGAACACATCGTGAATGGAGGTGTGTGCACAGTGTTCGCGAAAATCCTCAAAGAAGGTAAAATGAAAGTTCAGGTTGTGGTGGCTTGGGCTATTTCAGAAATGGCAGCAAACCATCCCAAATGCCAAGATCATTTTGCTCAGAACAATGCAATAAGATTGCTGGTTAGTCATCTTGCATTTGAGACCATTCAAGAACATAGTAAATATATCATGCCAAATGCCAAGCAGAAAATATCAATGCATTCCGTTGTGATGGCAAGCAACGATCACAATTCCAATAATAAAACGGAATATGACACCGAAATGGCTTTGAAAGTTCCTCACCCTTCGGGACACACGGGATCCAACAATATGCATAACGTGGTTTCGGACACCGTGACAATGATGAAACAAAGTTCTGGTCGACATGATGATCAGTCCAAGCCAGTTACACCGTCCCAAACAAGTAACATGCAGCGATACCAAGGCGGCAAGAGTACCGATAATCGTAGTAATACAAAGCAGGGACATGTTTCAATCGCAGGGACGAGCATCAAAGGAAGAGAATGTGAAGATCCTGAGACAAAGGCCCAAATGAAGGCTATGGCTGCCAAAGCCCTTTGGCAACTGGCAAGAGGCAATGTCAGTGTATGTCGTAGCATCACTGAATCGAGAGCGCTCTTATGCTTTTCAGTTCTGCTAGATAAGGGGCCTGAGGATGTTCAGTCCTACTCAGCTATGGCATTGATGGAAATTACAGCAGTAGCAGAACAAAATTCAGACTTGAGGCGATCTGCTTTCAAACCTACTTCCCCAGCTGCCAAGGCAGTAGTTGACCAGTTCCTGAAAATCATTGAGAAGGCAGATTCTGACCTCCTTATACCTTCCATTAGATCTATAGGCCACTTAGCGAGGACTTTTAAAGCTACAGAAACAAGATTAGTTGAACCATTGGTGAAGCTGCTTGATGAAAGAGAACTCGAAGTTTCAATGGAGGCAGCCATTGCACTTAACAAGTTTGCTTGCCCAGAAAACTTTCTTCATGTGACTCACTGCAGTTCTATCATAAGTGCAGGTGGTGCGAAGCATTTAATCCAACTAGTTTATTTTGGGGAGCAGATGGTTCAAATTCCAGCAGTGATTCTTTTATGCCATATTGCGTGTCATGTCCCCACAAGTGAGACGCTGGCGCAAGAAGAGGTGCTTATAGTTATTGAATGGTCAACCAAGCAGGTACATCTAATGGAAGATCCTTCCATTGAAGCACTATTACTAGAAGCCAAAACTAGGTTGGAACTCTACCAGTCAAAGGGTACAAGAGGATTCCATAAATCACTTGGAATTTAA 1950 0.4533 MADQVTKAADGAVSFKQDCLELKTKTEKLAGLLRQAARASGDLYERPTKRIIDDTEQVLDKALTLVTKCRANGMRRLFTIIPTAAFRKTSTQLENSVGDLQWLLRVSAPAEERDDEYLGLPPIAANEPILCLIWEQIAILLSADSLEERSDAAASLVSLARDNDRYGRLIVEEGGVPPLLRLLKEGQTEGQENAARAIGLLARDPESVEHIVNGGVCTVFAKILKEGKMKVQVVVAWAISEMAANHPKCQDHFAQNNAIRLLVSHLAFETIQEHSKYIMPNAKQKISMHSVVMASNDHNSNNKTEYDTEMALKVPHPSGHTGSNNMHNVVSDTVTMMKQSSGRHDDQSKPVTPSQTSNMQRYQGGKSTDNRSNTKQGHVSIAGTSIKGRECEDPETKAQMKAMAAKALWQLARGNVSVCRSITESRALLCFSVLLDKGPEDVQSYSAMALMEITAVAEQNSDLRRSAFKPTSPAAKAVVDQFLKIIEKADSDLLIPSIRSIGHLARTFKATETRLVEPLVKLLDERELEVSMEAAIALNKFACPENFLHVTHCSSIISAGGAKHLIQLVYFGEQMVQIPAVILLCHIACHVPTSETLAQEEVLIVIEWSTKQVHLMEDPSIEALLLEAKTRLELYQSKGTRGFHKSLGI* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00458 649 Gene3D - 1 106 IPR036537 GO:0007166
Pte11g00458 649 Gene3D - 386 624 IPR011989 -
Pte11g00458 649 SUPERFAMILY ARM repeat 135 603 IPR016024 -
Pte11g00458 649 Pfam Armadillo/beta-catenin-like repeat 169 203 IPR000225 GO:0005515
Pte11g00458 649 Gene3D - 134 303 IPR011989 -
Pte11g00458 649 FunFam Armadillo repeat only 2 135 306 - -
Pte11g00458 649 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 216 IPR000225 GO:0005515
Pte11g00458 649 MobiDBLite consensus disorder prediction 337 381 - -
Pte11g00458 649 SMART arm_5 204 244 IPR000225 GO:0005515
Pte11g00458 649 SMART arm_5 549 589 IPR000225 GO:0005515
Pte11g00458 649 SMART arm_5 415 455 IPR000225 GO:0005515
Pte11g00458 649 SMART arm_5 162 203 IPR000225 GO:0005515
Pte11g00458 649 PANTHER ARMADILLO REPEAT ONLY 4 1 640 - -
Pte11g00458 649 MobiDBLite consensus disorder prediction 337 393 - -
Pte11g00458 649 FunFam Armadillo repeat only 2 378 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00458 Pte-Chr11 4558531 4560480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00458 141 232 U-box Gene Family AT1G71020 34.409 7.08e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00458 - - qsa:O6P43_002104 939.873