Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00455 ATGAGAATTCCCTTATTCTCAAGCCAACGTGGCTTTCTTTCTTCTATATCCCATTTCCAGTGTTTTAAACTTCCTCAGTTTCTACCTCCGACAAAAGAAACAGCAGCTTCTGCTTTTTCAAACATTTCCTGGCCTCGCATGAACTACACAACCAACAACGTTCCTGCCTGTTTCTACCACCGCCATCGCCGGCGAAAAGATCAAAAGGTGTTGGTCATACTGGGGGCAACAGGCACGGGAAAGTCTCGACTGTCCGTTGACCTAGCTACCAGATTCTTCCCTAGCTCAGAAATCATCAACTCCGACAAAATGCAAATGTACAGAGGCCTTGACATCACGACCAACAAGATCTCCATGGACGAACGCCGTGGTGTCCCGCACCATCTTCTTGGTCATTTCGACCCACTTCAAGGTGAAGTAAACCCGGCCCATTTTCGTTCCGTCGGTGCCTCCGTCATTGCCCAAATCGCTTCCAGAAGTAACCTGCCCATGATCGTGGGTGGCTCCAACTCTTTCATTCACTCACTGCTGGTGGACTCCTTCCATCCTGACTCAGACCCCTTCCACGAATCTTTACCCTTGTGTTCGATCTCGTGCGAGTTGAGATACAAGTGTTGCTTCCTGTGGGTGGACGTGTCCTTCCCTGTGCTATCGGATTATCTATCCAAACGAATAGATGACATGCTCGACCTGGGAATGGTGGAGGAGCTGGCCGAGTTTTATGACCCGGAAGCAGACGATTTACAACGAGAATCTGAACACCGGGTCGGGCTAAGAAAAGCGATCGGAGTTCCAGAGTTTGATCGTTATTTCAAAAAGTGTCCACCTCCGGAGGGACTGAAAGAAGTCACGAAGGGAAGGGCAGAGGAGAAAGGTGATGGTCTACGGAGAAGTCCATATAAAGAAGCAGTGAGGTCGATCCAAGAAAACACGTGTCGTCTAGCGAAGAGGCAGATAGTGAAGATCCATCGGTTGAGAATGGGAGGTTGGGACCTACATAGAGTGGACGCAAGCGAGTCCTTCCGGGCTGCGATGGTGACGTCAGGCAATGGCAGCGTGAATGAGATTTGGGAGAGGGAGGTGTTGGAGCCAAGCGTGAAGATTGTGAAACGGTTCTTGAAGGAGTAG 1128 0.5 MRIPLFSSQRGFLSSISHFQCFKLPQFLPPTKETAASAFSNISWPRMNYTTNNVPACFYHRHRRRKDQKVLVILGATGTGKSRLSVDLATRFFPSSEIINSDKMQMYRGLDITTNKISMDERRGVPHHLLGHFDPLQGEVNPAHFRSVGASVIAQIASRSNLPMIVGGSNSFIHSLLVDSFHPDSDPFHESLPLCSISCELRYKCCFLWVDVSFPVLSDYLSKRIDDMLDLGMVEELAEFYDPEADDLQRESEHRVGLRKAIGVPEFDRYFKKCPPPEGLKEVTKGRAEEKGDGLRRSPYKEAVRSIQENTCRLAKRQIVKIHRLRMGGWDLHRVDASESFRAAMVTSGNGSVNEIWEREVLEPSVKIVKRFLKE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00455 375 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 68 373 IPR039657 -
Pte11g00455 375 Gene3D - 68 373 IPR027417 -
Pte11g00455 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 248 IPR027417 -
Pte11g00455 375 Pfam IPP transferase 202 319 - -
Pte11g00455 375 Pfam IPP transferase 105 181 - -
Pte11g00455 375 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 214 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00455 Pte-Chr11 4492939 4494248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00455 202 374 C2H2 Transcription Factor Family AT2G27760 27.807 1.63e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00455 K10760 - qsa:O6P43_032737 418.698