Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00452 ATGGGCGATCAACTTGAGTACTGCAACCAAGAAACTAGAAAACTAAACTCTTCTACTCCTACCCCTTTAAAACTCTTCGGCTTTAGTGTAAACGAAGACATGGAAGATCAAGCATCGATCAATATTGAAGAAGTAGCAGATTCAGTTATCAATAAGCCAACTGCTCCTTCCGGTTCACCTGATTCCGACGGCGGTCTTAGCGGTAGCGGGACCTCTTTCCCTTCTTCTTCCGGTGATAGAAAGTATGAGTGTCAGTACTGTTGTAGAGAATTTGCTAATTCGCAAGCACTTGGTGGCCATCAAAATGCTCATAAGAAAGAGCGTCAGCAGCTTAAACGTGCTCAGCTACAATCAACAAGAAATGCTGCCATTTCATTCGTTCGAAACCCTATAATCTCTGCTTTCGCTCCTCCACCTCATATATTGGCTCCGCCAGGTCCAGTGGTGGTTCCGGCACCTCCTCCGTCGTGGGTCTACATGCAGCCACGGGCTGCTCAGCCATCATTCCAGGTGTCTCATGGTTGTGTTTTCCCATCCACTTGTAACTCTGCATTTAGTAATAACTGTAGTGGTGGTAGCAGTAGCACTCATGGTTCCGGAGGTAGATCTGCCGGTGCAGGGATCTTAGCGTATGGTGGCAGTGTGGGGGATTCAACGATGGCGTTTTCAACAATTGGGTCACAAGTGCAAGTTGGGGTCCACGGAAGACTTGATGGACTGTCTTTGAGTAAAACATTTTCTAAAGGCGATGGTGGGCCCAATTTTGATGATTCGATGGGTTTGGACTTGCATCTGAGTCTCGCGCCAGCTGGATCGTAA 819 0.475 MGDQLEYCNQETRKLNSSTPTPLKLFGFSVNEDMEDQASINIEEVADSVINKPTAPSGSPDSDGGLSGSGTSFPSSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQSTRNAAISFVRNPIISAFAPPPHILAPPGPVVVPAPPPSWVYMQPRAAQPSFQVSHGCVFPSTCNSAFSNNCSGGSSSTHGSGGRSAGAGILAYGGSVGDSTMAFSTIGSQVQVGVHGRLDGLSLSKTFSKGDGGPNFDDSMGLDLHLSLAPAGS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00452 272 MobiDBLite consensus disorder prediction 9 23 - -
Pte11g00452 272 FunFam Zinc finger protein 6 72 132 - -
Pte11g00452 272 MobiDBLite consensus disorder prediction 50 78 - -
Pte11g00452 272 MobiDBLite consensus disorder prediction 52 78 - -
Pte11g00452 272 PANTHER ZINC FINGER PROTEIN 5 14 271 IPR044299 GO:0010090
Pte11g00452 272 MobiDBLite consensus disorder prediction 1 23 - -
Pte11g00452 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Pte11g00452 272 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Pte11g00452 272 Gene3D Classic Zinc Finger 69 129 - -
Pte11g00452 272 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00452 Pte-Chr11 4455961 4457009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00452 18 271 C2H2 Transcription Factor Family AT1G68360 43.704 4.93e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00452 - - qsa:O6P43_032725 287.345