Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00426 ATGGCTGCTGGCAATCCCAGCTCTGAACAGCTCCCACCTGGATTTAGGTTCCATCCGACTGATGAAGAACTCATTATGCATTACCTTCGTAACCAGGCAACCTCAAGGCCACTACCTGTGTCCATTATCCCAGAAGTTGATATTTACAAGTTTGACCCCTGGGAGATTTACAAGAAGAAGCACTTGACAAAAGCAATGGAGAAAAAAGAAGAACCAAGTGCCTCATTTACCATGGGGGGAGTCAATGACCAACAGATGATGATGAAATTTTCTAGGACCTGTTCCTTTACAAATCTTCTGGAAATGGAGTTTGGTTCAGCCACTCAGTTACTTGGTGGGGACAGTAGCTATAACAATCCAACACTTGATTTCCAAAACAACATAGGAAATTTTGGAAATGTCCTTTATGAGAAACCTTATATTGGTCAAGTGCATACACACTATGCACCAGATTCAGAGAAGTTACAAGTGAACCAAAGCAGCATGAACAACCAGTCGATACTGTATGGGAGTCAGGTGTATGATTCGTTTGGATTTGAGAGATGA 546 0.4212 MAAGNPSSEQLPPGFRFHPTDEELIMHYLRNQATSRPLPVSIIPEVDIYKFDPWEIYKKKHLTKAMEKKEEPSASFTMGGVNDQQMMMKFSRTCSFTNLLEMEFGSATQLLGGDSSYNNPTLDFQNNIGNFGNVLYEKPYIGQVHTHYAPDSEKLQVNQSSMNNQSILYGSQVYDSFGFER* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00426 181 ProSiteProfiles NAC domain profile. 11 181 IPR003441 GO:0003677|GO:0006355
Pte11g00426 181 Pfam No apical meristem (NAM) protein 12 61 IPR003441 GO:0003677|GO:0006355
Pte11g00426 181 Gene3D NAC domain 20 85 IPR036093 GO:0003677|GO:0006355
Pte11g00426 181 SUPERFAMILY NAC domain 9 60 IPR036093 GO:0003677|GO:0006355
Pte11g00426 181 PANTHER NAC TRANSCRIPTION FACTOR 56 11 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00426 Pte-Chr11 4241718 4244016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00426 7 59 NAC Transcription Factor Family AT1G69490 75.472 8.06e-24 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte11g00426 NAM 8.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00426 - - pop:7481574 103.605