Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00417 ATGGATCTGCAAAAACAAGCTGGAATGAATTTGGTCTTGTCCACTGATGCTAAGCCAAGGCTGAAATGGACCCCAGAACTTCACCAACGATTTGCCGAAGCAGTTACTCAGCTTGGAGGACCAGAGAAGGCAACTCCAAAGAGTCTGATGAGGGTGATGGGAATTCCAGGACTTACACTATATCATCTGAAAAGCCATTTGCAGAAGTTCAGACTGGGAAAAAGTCAACAACCAGAAGCTTTGTCGAACAATAAGCAAGAAGACTACAAAGATAATCAAAGCAGTGATAGCCATTGCAGTAGGGATATCAGTGGTGAAACCTATAGCCAGAATCAAGTGAACGAAAACCTGCAGATAGCTGAGGCTCTCCAGATGCAAATGGAAGTGCAGAGAAAACTCCATGAACAAATTGAGGTACAAAGGCGTTTGCAGTTGCGAATTGAAGCTCAAGGGAAGTACCTGCATTCAGTGCTAAAGAAAGCTCAAGAAACATTGGCTCAATATAGTTCTTCCTCAGTTGGCATAGAAACAGCAAAAGCTGAACTGTCTCAGTTAGTCTCAATAATAAGCAATGCTTGTCCAAGTTCTCCAGTCTCTGATTTGACAGAAACAAGGTTCATAAACTTCAAAGATGTGGAGAGAAAAATAGAAGGTACGATATCTTCATTAGAGAGCTCCTTGACATCATCAGAGAGTTCTGAGAGGAAAGTTGAAAAGCAGCCAATGATTGAGATCTGGGACCCTCAAGTATCCGACAGGACTTCAGTAGTAGAATTGCCACTAATGGCGATCAATTCACCAGACAAGACAGTAAATGGTAACGGAAGCAGTCAACAAGCAAACGGGAGAAAAAAAAATGGAGTAATCAATTTTGACGATGGTTCCACTGAGCAACCATTTGGAAAGAAAAGTGGTAACAAGTTACGCAGATACGAATTGTCACAAATGCTAGACTTAAACAGCCAGTATCAAAGTCATGACATCCACTCTGGTACAAAAACATTTGACCTAAATTGCCAAGGAACTGAGCACTTCATTAGTGGGACCTTCTAA 1053 0.4169 MDLQKQAGMNLVLSTDAKPRLKWTPELHQRFAEAVTQLGGPEKATPKSLMRVMGIPGLTLYHLKSHLQKFRLGKSQQPEALSNNKQEDYKDNQSSDSHCSRDISGETYSQNQVNENLQIAEALQMQMEVQRKLHEQIEVQRRLQLRIEAQGKYLHSVLKKAQETLAQYSSSSVGIETAKAELSQLVSIISNACPSSPVSDLTETRFINFKDVERKIEGTISSLESSLTSSESSERKVEKQPMIEIWDPQVSDRTSVVELPLMAINSPDKTVNGNGSSQQANGRKKNGVINFDDGSTEQPFGKKSGNKLRRYELSQMLDLNSQYQSHDIHSGTKTFDLNCQGTEHFISGTF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00417 350 MobiDBLite consensus disorder prediction 75 104 - -
Pte11g00417 350 Coils Coil 120 140 - -
Pte11g00417 350 MobiDBLite consensus disorder prediction 267 302 - -
Pte11g00417 350 Pfam MYB-CC type transfactor, LHEQLE motif 117 164 IPR025756 -
Pte11g00417 350 Pfam Myb-like DNA-binding domain 20 69 IPR001005 -
Pte11g00417 350 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Pte11g00417 350 Gene3D - 17 75 - -
Pte11g00417 350 MobiDBLite consensus disorder prediction 267 305 - -
Pte11g00417 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 271 IPR044848 GO:0003700
Pte11g00417 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pte11g00417 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 73 IPR006447 GO:0003677
Pte11g00417 350 FunFam Myb family transcription factor 17 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00417 Pte-Chr11 4182729 4184760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00417 6 304 G2-like Transcription Factor Family AT1G69580 49.518 3.62e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte11g00417 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00417 - - qsa:O6P43_025475 423.705