Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00409 ATGCTTCAAAGCTTGGTTCCGCGATCACCCATCAGCTCTGCGTCCAATCCGAGCTCATCCATGAAATCAAAACGTGCTGACCGCGACTTCGCCACCAGTGACTCCTCCGCGCCTGATGAAACCTCCGTGTTCAAAAGATCAAACCCGAGTAAGAGTTTCCCCGCTGAGGGCAGTGAATCCGGTGAGAAAATCGAAGGCCAAGAAGAGTCCGCAGTTGTCGACGGCGAGTCAACCGGGTTGAAACTTCTTGGCTTGTTGTTGCAATGCGCGGAATGCGTAGCTATGGATAATCTTGCCAACGCCAGCGACCTCTTGCCAGAAATTTCAGAGCTATCGTCGCCGTTCGGCACCTCACCTGAACGAGTTGGCGCGTACTTCGCTCACGCACTTCAAACACGCGTCGTCAGTTCCTGCCTCGGTAGCTACTCTCCACTCACCACCCAGTCTCTCACTCGAACTCAGTCTCAGCGAATTTTCAGCGCTTTCCAGACGTACAATTCAATCAGTCCACTCGTCAAGTTCTCTCACTTCACGGCCAACCAAGCTATCTTCCAAGCTTTAGACGTGGAGGACCGTGTCCACGTCATTGACCTTGACATCATGCAAGGACTTCAATGGCCAGGGTGGTTCCACATACTTGCCTCGCGGTCAAAGCAGATCCGTTCCGTGAGAATTACCGGATTCGGTTCCTCATCCGAGCTGCTGGAATCAACAGGGAGAAGACTCGCAGACTTCGCGAGATCACTTGGGTTGCCATTTGAGTTTCACCCATTGGAGGGCAAAATCGGAAGCGTAACTGACCTGAATCAACTCGATATTCGACCTGGCGAGGCTGTCGTAGTTCACTGGATGCATCACTGTTTGTACGACATAACAGGGAGTGATTTAGGGACGTTGAGATGGTTGACTTTGTTGAGACCCAAATTGATCACGATCGTGGAACAAGACCTGAGTCACGCGGGAAGCTTCTTGGGAAGGTTTGTGGAGGCCCTGCATTACTACAGCGCGTTGTTCGACGCGCTTGGGGATGGGTTGAGTGCAGAGAGCGCAGAGAGGCATACGGTGGAGCAGCAATTGTTTGGATCAGAGATAAGGAATATTGTAGCAGTCGGTGGGCCCAAGAGAACGGGAGAGGTGAAGGTGGAGAGGTGGGGGGACGAGTTGAAACGAATCGGGTTTAAGCCAGTGTCATTGCGGGGCAACCCGGCTTCTCAGGCTAGCTTGTTATTGGGCATGTTCCCATGGAAAGGATACACTTTAGTGGAAGAAAACGGGTCTCTCAAGTTGGGTTGGAAAGATCTGTCATTGTTGACCGCATCTGCTTGGCAACCGTCCGATTGA 1341 0.522 MLQSLVPRSPISSASNPSSSMKSKRADRDFATSDSSAPDETSVFKRSNPSKSFPAEGSESGEKIEGQEESAVVDGESTGLKLLGLLLQCAECVAMDNLANASDLLPEISELSSPFGTSPERVGAYFAHALQTRVVSSCLGSYSPLTTQSLTRTQSQRIFSAFQTYNSISPLVKFSHFTANQAIFQALDVEDRVHVIDLDIMQGLQWPGWFHILASRSKQIRSVRITGFGSSSELLESTGRRLADFARSLGLPFEFHPLEGKIGSVTDLNQLDIRPGEAVVVHWMHHCLYDITGSDLGTLRWLTLLRPKLITIVEQDLSHAGSFLGRFVEALHYYSALFDALGDGLSAESAERHTVEQQLFGSEIRNIVAVGGPKRTGEVKVERWGDELKRIGFKPVSLRGNPASQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00409 446 MobiDBLite consensus disorder prediction 1 21 - -
Pte11g00409 446 ProSiteProfiles GRAS family profile. 73 443 IPR005202 -
Pte11g00409 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 438 IPR005202 -
Pte11g00409 446 Pfam GRAS domain family 84 443 IPR005202 -
Pte11g00409 446 MobiDBLite consensus disorder prediction 35 55 - -
Pte11g00409 446 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00409 Pte-Chr11 4115206 4117236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00409 21 447 GRAS Transcription Factor Family AT5G41920 65.741 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte11g00409 GRAS 1.9e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00409 - - zju:107404603 699.508