Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00388 ATGGGAGTAGTTGCTAAGAATGGTCAAGTAGAATCTAGGGAAGTGCCTAAATCAAACGGAAGGAAGAAGAAGGGTGATGAGGTCGTGGAAGAAGAGGAGACTGGGTGCTGGCTAACGCTGAGGTTCTTCGGCAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAATTAGTGGCACCACCACTCATTATGCTGAAAGTAAGTCGACCAACGATTCAAAGGACCAACCGTCGGTCCCAGTAATATCACCCTCCTCAACAAGTAATGCAGAAAGTAATTCGTCTACTTCGAAGCTTGAAGAGGACCTGAAAGTTTCTTCAAGGCTACGAAAATTTGGATTCAATGATCTGAAGTTGGCGACAAGAAATTTTAGACCAGAGTCTCTTCTTGGGGAAGGTGGTTTTGGATGTGTGTTCAAGGGATGGATTGAGGAAAATGGAACTGCGCCAGTTAAACCTGGTACAGGGCTTACAGTTGCTGTAAAGACCCTTAACCATGATGGACTTCAGGGACACAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTGGTTCATCCAAACCTAGTTAAACTTATTGGTTACTGTATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGTGGAAGCTTGGAAAACCACCTATTTAGGAGGTCTCTCCCTCTTCCATGGTCCATCAGGATGAAAATTGCACTAGGAGCTGCAAAGGGTCTCGCTTTTCTTCATGAAGAAGCAAAGAGGCCAGTCATTTACAGGGATTTCAAAACATCCAACATCCTATTAGATGCAGATTACAATGCCAAGCTTTCAGATTTTGGACTTGCAAAAGATGGTCCAGAGGGAGATAAAACTCATGTTTCAACTCGTGTTATGGGAACATATGGCTATGCTGCACCAGAATATGTGATGACAGGACATCTAACTTCAAGGAGTGATGTTTATAGTTTTGGAGTGGTACTGCTTGAGATGTTGACTGGCAGAAGGTCCATGGACAAGAACCGGCCCAATGGAGAGCATAACCTTGTGGAATGGGCTAGACCGCATTTGGGAGAGCGGAGGAGGTTTTACCTGTTAATAGATCCTCGGCTGGAAGGTCACTTTTCAATAAAAGGTGCCCAGAAGGCTGCACAGCTGGCTGCTCATTGTCTTAGTCGGGATCCAAAAGCTAGGCCTTTGATGAGTGAAGTTGTCGAAGCTTTAAAGCCTCTGCCAAATCTTAAGGACATGGCAAGCTCTTCATATTTTTTCCAGACCATGCAAGCTGAGCGCTTTAAGGCCAGTCCCAACTCTAGAAAGGGACTAACACAGGTTCCAGTGCTTCCAAGGACTGGGCAGCAGCAAAGGAGCCTTTCAATTCCTAATGGTCCTCATGCCTGTCCTTATCATCGCCAACATTCTCCGCACCCGTCACCAAAACCTAGTGGCAAAGCATAG 1446 0.4537 MGVVAKNGQVESREVPKSNGRKKKGDEVVEEEETGCWLTLRFFGSCISSRSKVDSSISGTTTHYAESKSTNDSKDQPSVPVISPSSTSNAESNSSTSKLEEDLKVSSRLRKFGFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYLLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYFFQTMQAERFKASPNSRKGLTQVPVLPRTGQQQRSLSIPNGPHACPYHRQHSPHPSPKPSGKA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00388 481 PANTHER OS01G0588500 PROTEIN-RELATED 88 407 - -
Pte11g00388 481 FunFam Serine/threonine-protein kinase BIK1 91 209 - -
Pte11g00388 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Pte11g00388 481 MobiDBLite consensus disorder prediction 15 31 - -
Pte11g00388 481 MobiDBLite consensus disorder prediction 1 33 - -
Pte11g00388 481 Pfam Protein tyrosine and serine/threonine kinase 128 404 IPR001245 GO:0004672|GO:0006468
Pte11g00388 481 MobiDBLite consensus disorder prediction 430 457 - -
Pte11g00388 481 MobiDBLite consensus disorder prediction 51 100 - -
Pte11g00388 481 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Pte11g00388 481 SUPERFAMILY Protein kinase-like (PK-like) 101 404 IPR011009 -
Pte11g00388 481 ProSiteProfiles Protein kinase domain profile. 124 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00388 481 Gene3D Phosphorylase Kinase; domain 1 84 209 - -
Pte11g00388 481 Gene3D Transferase(Phosphotransferase) domain 1 210 425 - -
Pte11g00388 481 CDD STKc_IRAK 130 407 - -
Pte11g00388 481 MobiDBLite consensus disorder prediction 51 96 - -
Pte11g00388 481 FunFam Probable serine/threonine-protein kinase PBL8 210 425 - -
Pte11g00388 481 MobiDBLite consensus disorder prediction 430 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00388 Pte-Chr11 3941026 3944249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00388 93 404 Glycoside Hydrolase AT3G07070 56.151 2.27e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte11g00388 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00388 - - qsa:O6P43_025413 805.053