Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00380 ATGGGGGCGGTAGATTACTACAAGGTGCTGAAGGTGAATAGGAATGCGAGTGACGAAGAATTGAAGAAGGCTTACAAGAGAATGGCAATGAAGTGGCACCCAGATAAGAACAACCAACAACATCCAATTCAGAAAGAAGAAGCAGAAACTAAATTCAAGCAGATTTCTGAGGCTTATGATGTCCTTAGTGATCCACAAAAGCGTCAGATCTATGATCTCTACGGCTATTCTGGTCTCAATCCTCAATGGAGTTTCAAGGAGAACAGGAACGTTGAAAGACAGAGAACCAAGAAGGCACAGGCTGTTGAGACCAAGTTACTGTGCACCCTTGAGGAACTTTACAAAGGGTGCAAAAAGAAGATGAAAATCTCAAGGACAGTCATTGATGAATTCGGTAAGCAGAACATTGTCGAAGAAACTCTGAAGATAGACATCAAACCTGGTTGGAAAAAAGGTACAAAAATCACTTTTCCAGAGAAAGGAAACCAAGAAGTTGGAATTGCTCCTGCTGATCTCATATTTGTTGTGGACGAGAAACCTCATGATATTTTCAAGAGGGATGGAAACAATCTGCTGATTAGCCAGAAGATATCACTTCTTGAGGCTCTCACAGGGAAGACACTCATTTTGACGGCGCTGGATGGGAGGGCCGTTGAAGTCCCCCTTACAGATGTTGTGAAACCAGGTGATGATATGGTGATCCCAAATGAAGGGATGCCTAATCCAAAGGAACCCAGCAAGAAAGGAAAGCTTCGGATCAAATTCGATGTCGATTTTCCATCAAGGCTTACATCTCAACAGAAGTATGATCTGAAAAAGATCCTGAGTGAAGCTGCTTGCTGA 843 0.4282 MGAVDYYKVLKVNRNASDEELKKAYKRMAMKWHPDKNNQQHPIQKEEAETKFKQISEAYDVLSDPQKRQIYDLYGYSGLNPQWSFKENRNVERQRTKKAQAVETKLLCTLEELYKGCKKKMKISRTVIDEFGKQNIVEETLKIDIKPGWKKGTKITFPEKGNQEVGIAPADLIFVVDEKPHDIFKRDGNNLLISQKISLLEALTGKTLILTALDGRAVEVPLTDVVKPGDDMVIPNEGMPNPKEPSKKGKLRIKFDVDFPSRLTSQQKYDLKKILSEAAC* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00380 280 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Pte11g00380 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 103 182 IPR008971 GO:0006457|GO:0051082
Pte11g00380 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 268 IPR008971 GO:0006457|GO:0051082
Pte11g00380 280 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 275 - -
Pte11g00380 280 Pfam DnaJ C terminal domain 102 260 IPR002939 -
Pte11g00380 280 FunFam Dnaj homolog subfamily b member 98 179 - -
Pte11g00380 280 Pfam DnaJ domain 5 72 IPR001623 -
Pte11g00380 280 SMART dnaj_3 4 67 IPR001623 -
Pte11g00380 280 PRINTS DnaJ domain signature 25 40 IPR001623 -
Pte11g00380 280 PRINTS DnaJ domain signature 47 67 IPR001623 -
Pte11g00380 280 PRINTS DnaJ domain signature 67 86 IPR001623 -
Pte11g00380 280 PRINTS DnaJ domain signature 7 25 IPR001623 -
Pte11g00380 280 SUPERFAMILY Chaperone J-domain 2 85 IPR036869 -
Pte11g00380 280 CDD DnaJ 5 64 IPR001623 -
Pte11g00380 280 CDD DnaJ_C 102 263 - -
Pte11g00380 280 FunFam DNAJ heat shock family protein 180 275 - -
Pte11g00380 280 Gene3D DnaJ domain 2 100 IPR036869 -
Pte11g00380 280 Gene3D - 180 279 - -
Pte11g00380 280 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Pte11g00380 280 Gene3D - 101 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00380 Pte-Chr11 3900177 3902620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00380 6 74 C2H2 Transcription Factor Family AT1G74250 36.232 1.23e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00380 K09510 - qsa:O6P43_033076 419.853