LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g00375	ATGTCGAAGAGTGACTTGAAACTTCTTACAAGATGGTCAAGCCCTTATGGCATGAGAGCTAGGATTGCCCTTGAACTCAAATCCATTGAATATGAGTACATAGAAGAGATAATGTTTCCAAAAAGTGATCTACTGCTTCAGTCAAATCCTGTACATAAAAAAGTCCCAGTTTTATTCCATGGTGATCGGATCATCTGTGAATCGCTTATTATAGTTGAATATATTGATGAAATTTGGCCCTCTAGTCCCTCAATTCTTCCTTCAGATCCTTCTGATCGTGCTGTTGCTCGATTCTGGGCTGCTTATATTGACAAGTGGTTTCCAAATGTAAAAAGCCTTATGATTGCTGAAGGAGCTGAGGCAAAGAAGCCCTTTATTCAGAATCTGAAGGAAGGGGTGGTACCCATGGAGCAAGCATATTGGAACTGCAGTAAAGGGAAGAACTTTTTTGGTGGAGATCGTATTGGGTATCTTGACATTGCTTTTGGAAGCTTCTTACCTTTGGTTAGTGCAGTAGAGAAGATAGAGGGAATTAAAGTGCTTGATGAAGAGACTCCTGCTTTGGTAAAATGGGCAGAGAGGTTCATTGCTGATGATGCTGTCAAGGACTTGCTACCAGATATTGACAAAGTTATAAAACTTTTTCGTAGCCTTATAGTCAGATGGAGGGCTTTAATCCCCAATCCCAACTGA	693	0.4055	MSKSDLKLLTRWSSPYGMRARIALELKSIEYEYIEEIMFPKSDLLLQSNPVHKKVPVLFHGDRIICESLIIVEYIDEIWPSSPSILPSDPSDRAVARFWAAYIDKWFPNVKSLMIAEGAEAKKPFIQNLKEGVVPMEQAYWNCSKGKNFFGGDRIGYLDIAFGSFLPLVSAVEKIEGIKVLDEETPALVKWAERFIADDAVKDLLPDIDKVIKLFRSLIVRWRALIPNPN*	231

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte11g00375	230	FunFam	Glutathione S-transferase U9	86	224	-	-
	Pte11g00375	230	Pfam	Glutathione S-transferase, N-terminal domain	5	77	IPR004045	-
	Pte11g00375	230	SUPERFAMILY	GST C-terminal domain-like	77	218	IPR036282	-
	Pte11g00375	230	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	9	212	IPR045073	-
	Pte11g00375	230	SFLD	Glutathione Transferase (cytosolic)	2	218	IPR040079	-
	Pte11g00375	230	FunFam	Glutathione S-transferase GSTU6	1	86	-	-
	Pte11g00375	230	CDD	GST_N_Tau	6	79	-	-
	Pte11g00375	230	Gene3D	Glutaredoxin	2	85	-	-
	Pte11g00375	230	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	89	218	IPR010987	-
	Pte11g00375	230	Gene3D	-	86	223	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g00375	Pte-Chr11	3879607	3881895	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g00375	1	224	Glutathione S-transferase Gene Family	AT1G10360	56.388	3.04e-81	241

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g00375	K00799		-	qsa:O6P43_025389	295.434

Showing 1 to 1 of 1 entries