Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00373 ATGGATCCAAGTGCAATGATGAGTGAAGGAGTGTTTCCAAATGCTGGTGGCAATGGAGGGTCGTTTAACTTGACTGAGATCTGGCAGTTTCCGATGAATGGCGGTGGCGATGCAGGCGTAGGGGAATCTGGGTTGGTTTTGAGAAATCCTCAGTTCGGGCATACTGATTTGGGGCAGTTTAGTAGGGAATATTCGGGTCCGAATCGGCATGTTTCAGGTAATGATCCAGTGAGTTCGGAGCAGAGAGTGAACAACCGCGTTGTTGCTGTAGCAAGAAAGAGACGTGATTCGGAGGATGAGTCAACCAAGGTTGTCTCTACTAGCAATGGTGCCAATCCTGTGAGTGATTGCAACGGGAAACGGCTTAAAGCGTCAGGATGCAATAATAATGACAAGCGTGATCACAAAGCTGAAGCAGAACACAGTTCAGGCAAGCATGTGGAACAAAATGCTCAGCCTCCTCCCGAACCTCCTAAAGATTATATTCATGTGCGAGCGAGACGGGGTCAAGCAACTGACAGCCACAGTTTGGCAGAGAGAGCTAGGCGTGAAAAGATAAGTGAGAGGATGAAAATACTTCAGGATTTGGTCCCGGGATGTAATAAGGTTATTGGAAAAGCACTTGTCCTGGATGAGATAATTAATTACATCCAATCTTTGCAGCGACAAGTTGAGTTCCTGTCAATGAAGCTTGAGGCAGTGAACGCAAGAGTACACCCTGGTATTCAAGAGTTTCCCGCTAAAGATTTTGATCAACAAACTTTTGATACTGCTGGTATGGTATTTGGTTCGCAAGCTACAAGAGACTACAGCCGTGGTTCATCGCCAGAGTGGTTGCACATGCAGATTGGCGGTGGTTTTGAAAGAACATCTTAA 876 0.4635 MDPSAMMSEGVFPNAGGNGGSFNLTEIWQFPMNGGGDAGVGESGLVLRNPQFGHTDLGQFSREYSGPNRHVSGNDPVSSEQRVNNRVVAVARKRRDSEDESTKVVSTSNGANPVSDCNGKRLKASGCNNNDKRDHKAEAEHSSGKHVEQNAQPPPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNARVHPGIQEFPAKDFDQQTFDTAGMVFGSQATRDYSRGSSPEWLHMQIGGGFERTS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00373 291 MobiDBLite consensus disorder prediction 126 145 - -
Pte11g00373 291 MobiDBLite consensus disorder prediction 87 102 - -
Pte11g00373 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 239 IPR036638 GO:0046983
Pte11g00373 291 Pfam Helix-loop-helix DNA-binding domain 174 221 IPR011598 GO:0046983
Pte11g00373 291 MobiDBLite consensus disorder prediction 57 159 - -
Pte11g00373 291 CDD bHLH_AtBPE_like 160 242 - -
Pte11g00373 291 MobiDBLite consensus disorder prediction 57 85 - -
Pte11g00373 291 FunFam Basic helix-loop-helix transcription factor 167 239 - -
Pte11g00373 291 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 76 261 IPR024097 GO:0006355
Pte11g00373 291 Gene3D - 167 241 IPR036638 GO:0046983
Pte11g00373 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Pte11g00373 291 SMART finulus 176 226 IPR011598 GO:0046983
Pte11g00373 291 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00373 Pte-Chr11 3866625 3869840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00373 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 52.448 1.72e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte11g00373 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00373 - - qsa:O6P43_025379 407.527