Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00369 ATGACTCGCACGTGCTCTCAGTGCGGGAACAACGGCCACAACTCACGGACGTGCACCGAAGCTGGAGGTGGAAGCGGCAGTGCTTCGGTCTCCGGTGAGCACCAACATGGTATCATGCTGTTTGGGGTTAGAGTCACTGAAGTTGCGAAATGTTTTAGGAAGAGTGCGAGCATGACAAATCTGTCTCAGTACGACCAGCAGCCTCAAGATTCCAACCCTGATGCTGGGTATGAATCCGATGATGTTGTTCATGCATCTGGTCGCGGCCGTGAACGCAAGAGAGGTGTGCCATGGACGGAGGAAGAGCACAAGTTATTCTTAGTGGGGTTGCAGAAGGTTGGCAAAGGAGATTGGAGAGGAATATCTAGAAACTTTGTCAAGACAAGGACGCCTACTCAGGTAGCAAGTCATGCTCAGAAGTACTTTCTCCGCCGGAGTAACCAGAATAGGAGACGCCGGAGATCTAGTCTGTTTGATATAACCACTGATACATTTACTGGCTCGTCTGCTGTAATTGAGGAAGAGCATCAACTGTCACAGCTGAGTGAGATGAGTACTGAAAGTTATGAAGGGTTTGGTGGTGGTTCCACTTTCCCTCTGCCAATTGCTCCGGTGATGGTACCCGTTGCTGCTACTGAGATCCTTCCTGCGGAAACTCTCAGATTGAGAAGTTCTGTTTCAACTAAGCCTATTAGGCCCATACCATTTATTCCAGTTCCTCCATCTTCAAAAATGGCTAATCTAAATCTGAACCAGAAATATACCAATGAATCTTTGCCTTTGTCACTGAAGCTACCAACGCCATCCTCGTCATCATCAGATGAGAAACCATCACAGGGAACACACTCATCGGCTTTTCAATCCATGTCTGGGAAGTTTGGTAACAGTGGAGATAGCATAATCACTGTTGCTTAA 915 0.4765 MTRTCSQCGNNGHNSRTCTEAGGGSGSASVSGEHQHGIMLFGVRVTEVAKCFRKSASMTNLSQYDQQPQDSNPDAGYESDDVVHASGRGRERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNQNRRRRRSSLFDITTDTFTGSSAVIEEEHQLSQLSEMSTESYEGFGGGSTFPLPIAPVMVPVAATEILPAETLRLRSSVSTKPIRPIPFIPVPPSSKMANLNLNQKYTNESLPLSLKLPTPSSSSSDEKPSQGTHSSAFQSMSGKFGNSGDSIITVA* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00369 304 MobiDBLite consensus disorder prediction 62 96 - -
Pte11g00369 304 CDD SANT 97 142 IPR001005 -
Pte11g00369 304 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
Pte11g00369 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 144 IPR006447 GO:0003677
Pte11g00369 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 146 IPR017930 -
Pte11g00369 304 FunFam transcription factor MYB1R1 96 147 - -
Pte11g00369 304 Pfam Myb-like DNA-binding domain 97 142 IPR001005 -
Pte11g00369 304 PANTHER TRANSCRIPTION FACTOR KUA1 1 253 - -
Pte11g00369 304 SMART sant 94 144 IPR001005 -
Pte11g00369 304 MobiDBLite consensus disorder prediction 259 304 - -
Pte11g00369 304 MobiDBLite consensus disorder prediction 81 96 - -
Pte11g00369 304 MobiDBLite consensus disorder prediction 1 31 - -
Pte11g00369 304 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Pte11g00369 304 SUPERFAMILY Homeodomain-like 92 146 IPR009057 -
Pte11g00369 304 Gene3D - 96 147 - -
Pte11g00369 304 ProSiteProfiles SANT domain profile. 93 146 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00369 Pte-Chr11 3838977 3841069 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte11g00369 Myb_DNA-binding 1.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00369 - - qsa:O6P43_025371 361.688