Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00362 ATGGCTGTGATGTTCCAGCCATGGCTTGTCTTGAGCCTATTCTTTGCTTTTCACAACTTCGTAACAATTTGTAATTGCCAGCATAATGGTCCTAGGAACATTGAAACTTTCTATCCCTCTGCTCCTTCTGATCCTCCAACACGGCAACCGCCTCCAGTATTACAACCCCAGCTGCCTCCTCCACCACAAGTGCCGTCAAGTAGGTCCTCATCAAACACAAGGAGTAGGATAGCAAAAGCCGTAGCTGTAACAGCAGCAGGGACTCTGGTGCTTACTGTGATAGCTATCTTTTTTGTTAGGAAATGCGTTGTTGCAAGGCGCAAGAATGAAGAGACTAACGGTGGATCTCCGAGAGATAGACGAATTGTGCCTCAACTGAATGAGTTTGAACGTTTCAACGGAAATTTCAAAGGGTTTATTGTTGACGAGAATGGTTTGGATGTTGTTTATTGGAGAAACCTTGAAGGAAGGAAGTCCAGGGGATTCAACAAAGAAGGCCTTAATGGTTCCAGGAAGAACAAGAGCAAAGAAGCTGTAGAAGATGAAAAGGTTGAAGAAGAAGATGGAAGTATAATAAGAAAAGGAAGCCAAAAAAAGAAACGTGAGGTCATTCAAGAAATTCCACTGCTTCGTGGGAAGTCTTCATCTTCACATTTATTTGTCTCAGAAGAAGATGATCGTGCAGATAGGATAACCACGATAAATCATCTCACTCGCAGTTCTAGTTCATCTGCAAGATATCTCAAGGGTATTCAAAAACCAGACGCCTCTAGTTCTTCAACTCCACCGCCTCCCCCTTCTCCACCACCAACACCACCTTCTCAGTTACGGGAGCCCCTTGCTTTTTCAGCTGTTTCTAAACAGCAAAGTCCTACACCACCTACCCTTCCACCAATCTCAGACAGGAAAACTCCTGAAATACCTCCTCCTCCTCCTCCAAGCAAAGGTCCTGCACCACCACCCCCTCCACCTAACGGATATAGCTTAAATTCAACAGCAAAGCCACCACCAGCGCCTAAAGAAATGGTGAGTGATTCTAAACGGGGAAATCCTTCTGGGGAAGGAATGGCAGGAAATGCAAATGATCAGGTCAAACTGAAGCCCTTGCACTGGGATAAAATTAACGCCAATGCAAACCATTCCATGGTTTGGGACAAAATTGATGGTGGTTCTTTCAGGTTTGATGGAGATCTCATGGAAGCTCTCTTTGGCTCTGTTGCTGCAAACAAAAGATCTCAGCAAGCAAAGAGCAATGCACAGAGTTCAATCAATTCTAATGCTGTCCAGTCAGCAAAAACTTTCATTCTTGATCCCAGGAAATCACAGAACACGGCTATTGTCTTAAAATCTCTTAACACCTCCCGCGAAAAGATTATTGATTCACTGAAAGAGGGAGAAGGTCTCAGTGTTGATACTATAGAAAAACTAGCTAGAATTTCTCCAACAGAAGAAGAGCAGTCCCTTATCCTTGATTACAAAGGAGACCTATCAAGACTTGCAGATGCTGAAGCATTTCTTTGTCAAATACTTAAAGCTGTTCCTACAGCTTTTAAACGTTTGGATGCTATGCTTTTCAGACTGAATTTTGATTCAGAGTTTCTGCAGTTGAAGGAATCTTTACAAACACTTGAGCTAGGTTGCAAGGAGCTTCGAAAAAGGGGTTTATTCACGAAACTACTTGAAGCAATTCTAAAGGCTGGTAATCGAATGAATGCCGGTACTACACGAGGGAATGCTCAAGCATTCAACCTTACAGCTCTGAGGAAACTTTCTGATGTTAAAAGCATGGATGGCAAAACTACCTTACTCCATTTTGTGGTTGAAGAGGTAGTCCGTTCTGAAGGAAAACGTTGTGCAATCAATCTTAATCGCAGCTTGAATCGTAACAACAGTTCAAGCAGCAAAAGCTACTTGAATGTTGATCAGAGCTTAGCCTCAGAAGAAGAAAAGGATAGAGAATATGTCAAGCTAGGATTGCCTATTGTTGGAGGGCTCAGTGCTGAGTTCTCCAACGTTAAGAAATCAGCTGCCATCGATTATGATAGTTTCAATTTGACATTGTCGGCTCTCGGATCCCATATGTCTCAAATTAGAGATATTGCGATTGAATGTGATGATGGTGGAGGGGGGAGATTTGCAAGAGAGACGAAGAGTTTTCTTGAAAATGCAGAACGACAACTGAAGATGGTGAAAGAAGATCAAGCAAAGGTGATGGAACATGTTAAAAGAACAACAGAATACTATCAATCAGGATCTTCAAAGAATAGAGAAGCTCATCCACTGCAACTATTTGGGATAGTCAAGGATTTCCTTCGAATGGTCGACCAAACATGTATTGAGATTGCACGTAACATGCAGAAGAGGAAGATATCAATGTCATCACCATTACTTGAAGCTCCAGCAGCCAGGGCTCCCGTAAAGTTTCCGAATATGCGCGGACGTTTTATCTTAGATAATTCCGGAAGTTCATCAAGCGACTCAAATGATGGTTCTTAA 2496 0.4259 MAVMFQPWLVLSLFFAFHNFVTICNCQHNGPRNIETFYPSAPSDPPTRQPPPVLQPQLPPPPQVPSSRSSSNTRSRIAKAVAVTAAGTLVLTVIAIFFVRKCVVARRKNEETNGGSPRDRRIVPQLNEFERFNGNFKGFIVDENGLDVVYWRNLEGRKSRGFNKEGLNGSRKNKSKEAVEDEKVEEEDGSIIRKGSQKKKREVIQEIPLLRGKSSSSHLFVSEEDDRADRITTINHLTRSSSSSARYLKGIQKPDASSSSTPPPPPSPPPTPPSQLREPLAFSAVSKQQSPTPPTLPPISDRKTPEIPPPPPPSKGPAPPPPPPNGYSLNSTAKPPPAPKEMVSDSKRGNPSGEGMAGNANDQVKLKPLHWDKINANANHSMVWDKIDGGSFRFDGDLMEALFGSVAANKRSQQAKSNAQSSINSNAVQSAKTFILDPRKSQNTAIVLKSLNTSREKIIDSLKEGEGLSVDTIEKLARISPTEEEQSLILDYKGDLSRLADAEAFLCQILKAVPTAFKRLDAMLFRLNFDSEFLQLKESLQTLELGCKELRKRGLFTKLLEAILKAGNRMNAGTTRGNAQAFNLTALRKLSDVKSMDGKTTLLHFVVEEVVRSEGKRCAINLNRSLNRNNSSSSKSYLNVDQSLASEEEKDREYVKLGLPIVGGLSAEFSNVKKSAAIDYDSFNLTLSALGSHMSQIRDIAIECDDGGGGRFARETKSFLENAERQLKMVKEDQAKVMEHVKRTTEYYQSGSSKNREAHPLQLFGIVKDFLRMVDQTCIEIARNMQKRKISMSSPLLEAPAARAPVKFPNMRGRFILDNSGSSSSDSNDGS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00362 831 Gene3D Formin, FH2 domain 374 803 IPR042201 -
Pte11g00362 831 Pfam Formin Homology 2 Domain 362 775 IPR015425 -
Pte11g00362 831 MobiDBLite consensus disorder prediction 291 330 - -
Pte11g00362 831 SMART it6_source 356 789 IPR015425 -
Pte11g00362 831 MobiDBLite consensus disorder prediction 161 201 - -
Pte11g00362 831 ProSiteProfiles Formin homology-2 (FH2) domain profile. 356 800 IPR015425 -
Pte11g00362 831 MobiDBLite consensus disorder prediction 239 257 - -
Pte11g00362 831 MobiDBLite consensus disorder prediction 239 363 - -
Pte11g00362 831 SUPERFAMILY Formin homology 2 domain (FH2 domain) 308 790 - -
Pte11g00362 831 PANTHER FORMIN-RELATED 23 800 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte11g00362 831 MobiDBLite consensus disorder prediction 43 66 - -
Pte11g00362 831 Coils Coil 713 740 - -
Pte11g00362 831 MobiDBLite consensus disorder prediction 258 276 - -
Pte11g00362 831 MobiDBLite consensus disorder prediction 35 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00362 Pte-Chr11 3799996 3803105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00362 363 782 FH2 protein (formin) Gene Family AT1G59910 58.095 5.63e-152 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00362 - - qsa:O6P43_033101 770