Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00361 ATGGATGGGGTTGTTAAAGAAGGGTGGAGTTCCGAGGAGGTGGGGAGACTTCCTGTTTCACAGCCCGAGTCAGAAGAGGTTCATGTTTTGGCGGTTGATGACAGCCTAGTTGATCGCAAAGTCATTGAGCATTTGCTAAAGGTTTCAGCATGCAAAGTGACGGCTGTGGACAGTGGAACAAGAGCCCTGCAGTTTCTTGGTTTGAATGGAGAGGAAAAGTCTTCCGTTCGCTTTGATTTAAAAGTGGATTTGATCATCACTGACTACTGCATGCCGGAAATGACTGGTTTTGAATTGCTCAAGAAGATCAAGGGGTCTTCTACTTTGCGAGAAATCCCAGTGGTGATTATGTCATCTGAAAATGTTTTGACACGCATTGATAGGTGCCTGGAAGAAGGAGCAGAGGATTTCATAGTGAAACCAGTGAAGCTATCTGATGTGAAGCGGTTGTTGAATTATTATATGAGAGAAATCAAAAGGGCTGAAAGTGAAGAAGCTGAAGAGCACACAAACAGACAAGTCAATTTAGATGGTGGAGGTGGAGGTTTTTGCAACAAGAGAAAGCTAAGAGAGAGTTACAATTTCTGTTCATCGACACAATCCATTTTGTCATCAACAACTTCATCATCTCTATCCAATTCACCATCCATCTCACCACTGTCATCATCTTCTCCACGAGATTCTCCACCATCTACACCTACTCCACTGGATCAACAAATTCAGAGGGTTGAAAATGACTTAATAGTTAATACGAATTAG 759 0.4256 MDGVVKEGWSSEEVGRLPVSQPESEEVHVLAVDDSLVDRKVIEHLLKVSACKVTAVDSGTRALQFLGLNGEEKSSVRFDLKVDLIITDYCMPEMTGFELLKKIKGSSTLREIPVVIMSSENVLTRIDRCLEEGAEDFIVKPVKLSDVKRLLNYYMREIKRAESEEAEEHTNRQVNLDGGGGGFCNKRKLRESYNFCSSTQSILSSTTSSSLSNSPSISPLSSSSPRDSPPSTPTPLDQQIQRVENDLIVNTN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00361 252 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 204 IPR045279 GO:0009736
Pte11g00361 252 MobiDBLite consensus disorder prediction 1 20 - -
Pte11g00361 252 SUPERFAMILY CheY-like 27 162 IPR011006 -
Pte11g00361 252 Coils Coil 144 164 - -
Pte11g00361 252 MobiDBLite consensus disorder prediction 233 252 - -
Pte11g00361 252 CDD REC_typeA_ARR 29 150 - -
Pte11g00361 252 Gene3D - 27 183 - -
Pte11g00361 252 SMART REC_2 27 151 IPR001789 GO:0000160
Pte11g00361 252 MobiDBLite consensus disorder prediction 205 252 - -
Pte11g00361 252 ProSiteProfiles Response regulatory domain profile. 28 155 IPR001789 GO:0000160
Pte11g00361 252 Pfam Response regulator receiver domain 29 149 IPR001789 GO:0000160
Pte11g00361 252 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00361 Pte-Chr11 3795113 3796729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00361 14 233 Response Regulator Gene Family AT1G59940 56.087 5.64e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte11g00361 Response_reg 3.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00361 K14492 - qsa:O6P43_025360 236.498