Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00356 ATGCCGGCACACAGAACGAAATCAGAGAAGCATAATGCTGACAAGCAGCTTCGGCGGGATCCGTATGAGGTCCTCGGAGTCTCTCGGAGCTCTACGGATCAGGAAATCAAAGCCGCGTACCGGAAACTGGCACTCAAGTATCATCCCGACAAAAATGCAAATGATCCTGAAGCAGCAAATATGTTTAAGGAGGTAACATTTTCATACAATATCCTATCAGATCCTGATAAAAGGCATCAATACGACTCATCAGGTTTTGAGGCTGTTGAATCAGAGAGCCAAGACCTAGAATTGGATCTGTCAAGCTTGGGTACTGTGAATACCGTGGTTGCTGCACTTTTCAGTAAACTTGGTGTCCCAATTAAGACAACAGTGTCAGCAACCGTGTTGGAGGAGGCACTTAATGGTGTTGTCACCATTTGTCCACTTCCATTAGGACAACCTACATCTAAAAAGGTTGAGAAGCAATGTGCACACTTTTATTCATTTACTATAACTGAAGAGGAGGCCCGTGCTGGATTTGTATGTCGAGTACAGTCATCCGAGAAGAGCAAGTTCAAGTTATTGTATTTTGATCGGGAAGAGAACGGTGGATTGAGTCTAGCGCTTCAGGAAGAGAGTGCAAAAACTGGGAAAGTTACCTCTGCAGGAATTTATTTCCTTGGATTTCCAGTTTACCGGTTAGATCATATAACAAATGCAGGGGCTACTACAAATGATCCAGATACTGCATTTTTTAAAAAACTTGATGGGTTTTTGCCCTGTGAGCTAACTGAACTAAAGGCTGGTACACATGTTTTTGCTGTTTATGGTGACAACTTTTTTACGAGTGCAAGTTACACGATAGAAGCTCTTTGTGCTGCATCCTTTCAGCAGGAGAAAGAAAAACTTAGAGACGTTGAAGCTCAAATTTTAAGCAAAAGGGTGGAATTATCAAAATTTGAAACAGAATACCATGAGGTTCTTGCACAATTTACGGAGATGACCAGTCGATATGCACAAGAAATGCAAGAAATAGATCACCTTCTTAAACGAAGGAATGAAATACATGCATCATACACAACAGCTCCTTCAGTGAAGCGAAGTACAAGTAAAATTCGGAGGAGGAATTCTTCCAAGGAAGCCAATGAAGATGGCCAGTTGAGAGAGAGGATCCATGTGAAGGACAGATCGAAGAAGAAAAAATGGTATAAGATCCACATAAAGGTGGAAAAAAGAAAGACCTGCTAA 1230 0.4163 MPAHRTKSEKHNADKQLRRDPYEVLGVSRSSTDQEIKAAYRKLALKYHPDKNANDPEAANMFKEVTFSYNILSDPDKRHQYDSSGFEAVESESQDLELDLSSLGTVNTVVAALFSKLGVPIKTTVSATVLEEALNGVVTICPLPLGQPTSKKVEKQCAHFYSFTITEEEARAGFVCRVQSSEKSKFKLLYFDREENGGLSLALQEESAKTGKVTSAGIYFLGFPVYRLDHITNAGATTNDPDTAFFKKLDGFLPCELTELKAGTHVFAVYGDNFFTSASYTIEALCAASFQQEKEKLRDVEAQILSKRVELSKFETEYHEVLAQFTEMTSRYAQEMQEIDHLLKRRNEIHASYTTAPSVKRSTSKIRRRNSSKEANEDGQLRERIHVKDRSKKKKWYKIHIKVEKRKTC* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00356 409 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 7 408 - -
Pte11g00356 409 SMART dnaj_3 19 77 IPR001623 -
Pte11g00356 409 MobiDBLite consensus disorder prediction 1 22 - -
Pte11g00356 409 MobiDBLite consensus disorder prediction 355 381 - -
Pte11g00356 409 FunFam Chaperone protein dnaJ 16 4 102 - -
Pte11g00356 409 CDD DnaJ 20 74 IPR001623 -
Pte11g00356 409 Gene3D DnaJ domain 4 103 IPR036869 -
Pte11g00356 409 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Pte11g00356 409 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Pte11g00356 409 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Pte11g00356 409 PRINTS DnaJ domain signature 40 55 IPR001623 -
Pte11g00356 409 PRINTS DnaJ domain signature 22 40 IPR001623 -
Pte11g00356 409 PRINTS DnaJ domain signature 57 77 IPR001623 -
Pte11g00356 409 PRINTS DnaJ domain signature 77 96 IPR001623 -
Pte11g00356 409 MobiDBLite consensus disorder prediction 1 30 - -
Pte11g00356 409 Pfam DnaJ domain 20 82 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00356 Pte-Chr11 3709494 3713642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00356 18 83 C2H2 Transcription Factor Family AT1G74250 45.070 8.26e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00356 - - tcc:18609364 644.81