Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00352 ATGTCGATTGATTTACTCTCCAACAGCGAACTTCTCTGCAGTGAGGACTCTACAGGAATATTGTCCGGAGAGTCTCTGGAATGTTCATCCGATATTGATTCTTTCTTTTCAACAGAGGAATCCATCGCCAGATTCCTTCAACACGAGCAAAAGTTTGTGCCAGGATTTGACTACCTCTCGAGGTTTGAATCTCAGACTCTTGACGCCACCGCTAGAGAAGAATCGGTTGCATGGATTCTTAAGGTGCAAGCTTATTATGGTTTCCATCCATTAACGGCGTATCTGTCAGTCAACTACATGGATCGGTTTTTGTATTCTCGAAGGTTGCCGAAAACAAATGGGTGGCCAATGCAACTCCTAGCTGTTTCTTGTCTGTCTTTAGCTGCTAAGATGGAGGAACCTCTGGTTCCTTCTTTCCTTGACCTTCAGGTGGAAGGTGCTAAATATATATTCGAACCGAGAACAATTAGTCGAATGGAAATGCTAGTTCTTGGTGCACTTGATTGGAGCCTGCGATCTGTAACCCCATTCAGCTTTCTTGATTTCTTTGCATGCAAGCTCGATTCTACAGGAACTTTTGTTGGGTTTCTCATTTCACGGGCTACAGAAATAATTTTTTCCAATATACAAGAAGCTAGTTTTCTTGCGTACTGGCCATCTTGCATTGCTGCTGCGGCAATACTGTCTGCTGCCAATGAAATTCCTAATTTGTCTTTAGTTAATCCTGAGCATGCTGAGTCATGGTGTGATGGACTAAGAAAAGTAAGACTAGTCATTGATCATGATCAATTGGGTTATCAAGTATATATAGATACATAG 819 0.42 MSIDLLSNSELLCSEDSTGILSGESLECSSDIDSFFSTEESIARFLQHEQKFVPGFDYLSRFESQTLDATAREESVAWILKVQAYYGFHPLTAYLSVNYMDRFLYSRRLPKTNGWPMQLLAVSCLSLAAKMEEPLVPSFLDLQVEGAKYIFEPRTISRMEMLVLGALDWSLRSVTPFSFLDFFACKLDSTGTFVGFLISRATEIIFSNIQEASFLAYWPSCIAAAAILSAANEIPNLSLVNPEHAESWCDGLRKVRLVIDHDQLGYQVYIDT* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00352 272 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Pte11g00352 272 Gene3D - 44 235 - -
Pte11g00352 272 SUPERFAMILY Cyclin-like 156 231 IPR036915 -
Pte11g00352 272 SMART cyclin_7 77 165 IPR013763 -
Pte11g00352 272 Pfam Cyclin, C-terminal domain 174 254 IPR004367 -
Pte11g00352 272 Gene3D - 55 172 - -
Pte11g00352 272 SUPERFAMILY Cyclin-like 36 171 IPR036915 -
Pte11g00352 272 CDD CYCLIN_AtCycD-like_rpt1 71 169 - -
Pte11g00352 272 FunFam D2/4-type cyclin 55 172 - -
Pte11g00352 272 Pfam Cyclin, N-terminal domain 43 171 IPR006671 -
Pte11g00352 272 PANTHER CYCLINS 27 232 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00352 Pte-Chr11 3671136 3673241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00352 1 258 Core Cell Cycle Gene Families AT1G70210 66.412 4.79e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00352 K18810 - qsa:O6P43_025341 417.157