Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00345 ATGGCTCCAGCAAATAATAATTGGCTGTCCTTCTCTTTGTCTCCCATGGAAATGCTGAGCTCCTCTGACTCCCAGTTTGTTCCCTATGACCAGAGTTCTTCAGTTCCTTCCACTCATTACTTTGTTGATAACTACTATGAAAATGGCTGGTCAAATCCTAAGTCTCAAGTGTTGTACTCGGAGGTAGAAGACGACAACGGAAGCAAAGGTCAAGCTCAAAACATGGCAGACTCATCGATTTACGCAAGTTATATCGAGACACAAAGCCAAAACCACCCAGTACCAAAGCTGGAGGACTTTTTGGGTGATTCTTCGTCTCTTGTAAGATATTCTGATAGCCAAACAGAGACCCAGGATTCATCACTGACCCAACTATATGACCATGGCTCTGCGTACTTCAATGATCAGCAAGATCTGAAAGCAATAACTGCCTTTCAAGCTTTTTCTACCAACTCGGGTTCTGAAGTTGATGACTCGTCCTCAATTGGTAGAGCTCAGCTGACTAGCGGGGGTGAGTTTGCGGGCCATTCTATTGATCAGCCATCTGGTAATGAACTGGGGTTTTCCAGTCGTGGTACTGGCGCTTTGTCTCTTGCTGTGACTCAAAGTTCGGAGAAAGCCCTTGTCCCAGTTGATACTGATAGCAACAAGAAGATTGTTGATACTTTTGGTCAGCGAACATCAATTTACAGAGGAGTCACTAGGCACAGATGGACCGGTAGATATGAAGCGCATCTATGGGATAACAGTTGCAGAAGAGAGGGCCAAGCTAGAAAAGGGCGGCAAGTGTATTTGGGTGGTTATGACAAAGAAGACAAGGCTGCAAGAGCTTATGATTTAGCTGCTCTAAAATATTGGGGACCGACTGCTACCACCAACTTTCCTATTTCCAATTACACAAAGGAAATGGAAGACATGAAACTAGTGTCCAAGCAAGAATTCATAGCTTCATTAAGGAGGAAGAGCAGTGGCTTCTCTCGTGGTGCTTCTATATATAGGGGTGTCACAAGGCATCATCAACAAGGTCGATGGCAAGCAAGAATTGGTAGAGTTGCTGGGAACAAAGACCTTTACCTTGGAACGTTTGCAACTGAGGAGGAAGCGGCAGAGGCGTATGACATTGCAGCCATCAAGTTCAGAGGATCGAACGCTGTTACAAACTTTGAGATGAGTAGATACGATGTGGATGCTATTCAAACGAGTGCTCTTCCCATTGGTGGCGCAGCAAAACGTCTCAAGATTTCGTTAGAGTCGGAAACGAAGCCCGCCATCCACACTCAGCAACTCCACTGCACCCCCTTAGGTAGTAACATCCATTTCGCCGGCGTTCAAGGGTTTCAGCAACCCATGCCCTGTGGGATTCCATTTGATCCTGCAGCTGCTTATTACCATCCTAGCCTTTTCCAACACCTTCAGGGAAGCCACGTGGTCGGTGCGGATCCCTCTGGTACAGCCATCTCTGCAACTCCAATGACTACCATGCCAGCTGCAGAGTTTTTTCTGTGGCCCCACCATCAGTCATATTAA 1527 0.465 MAPANNNWLSFSLSPMEMLSSSDSQFVPYDQSSSVPSTHYFVDNYYENGWSNPKSQVLYSEVEDDNGSKGQAQNMADSSIYASYIETQSQNHPVPKLEDFLGDSSSLVRYSDSQTETQDSSLTQLYDHGSAYFNDQQDLKAITAFQAFSTNSGSEVDDSSSIGRAQLTSGGEFAGHSIDQPSGNELGFSSRGTGALSLAVTQSSEKALVPVDTDSNKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDKAARAYDLAALKYWGPTATTNFPISNYTKEMEDMKLVSKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGSNAVTNFEMSRYDVDAIQTSALPIGGAAKRLKISLESETKPAIHTQQLHCTPLGSNIHFAGVQGFQQPMPCGIPFDPAAAYYHPSLFQHLQGSHVVGADPSGTAISATPMTTMPAAEFFLWPHHQSY* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00345 508 SUPERFAMILY DNA-binding domain 228 297 IPR016177 GO:0003677
Pte11g00345 508 MobiDBLite consensus disorder prediction 153 167 - -
Pte11g00345 508 FunFam AP2-like ethylene-responsive transcription factor ANT 228 297 - -
Pte11g00345 508 Pfam AP2 domain 229 287 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 Pfam AP2 domain 331 381 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 MobiDBLite consensus disorder prediction 153 179 - -
Pte11g00345 508 PRINTS Ethylene responsive element binding protein signature 230 241 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 PRINTS Ethylene responsive element binding protein signature 371 391 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 CDD AP2 330 391 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 FunFam AP2-like ethylene-responsive transcription factor 330 391 - -
Pte11g00345 508 CDD AP2 228 297 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 SMART rav1_2 331 395 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 SMART rav1_2 229 301 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 ProSiteProfiles AP2/ERF domain profile. 331 389 IPR001471 GO:0003700|GO:0006355
Pte11g00345 508 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 88 421 - -
Pte11g00345 508 SUPERFAMILY DNA-binding domain 330 391 IPR016177 GO:0003677
Pte11g00345 508 Gene3D AP2/ERF domain 331 391 IPR036955 GO:0003700|GO:0006355
Pte11g00345 508 Gene3D AP2/ERF domain 229 297 IPR036955 GO:0003700|GO:0006355
Pte11g00345 508 ProSiteProfiles AP2/ERF domain profile. 229 295 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00345 Pte-Chr11 3632168 3636757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00345 50 509 AP2-EREBP Transcription Factor Family AT5G10510 58.684 3.61e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pte11g00345 AP2 6.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00345 K09285 - qsa:O6P43_033249 728.783