Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00343 ATGCATGGAATTGTTGATGAAAAGACGGATGTTTTTGCATACGGTGTTTTACTGTTAGAGCTCATAACGGGTCGCCGAGCAGTGGATTCAAGCAGACAAAGTCTTGTGATCTGGGCAAAACCATTGATTGATTCACACAATGTAAAGGAACTAGTGGATCCTCGATTGGGGGATGATTTTGATCCCAATGAAATGAACCGAGCGATGCTGACTGCTTCCATGTGCATGGATCACAAATCCTCCGAGCGGCCCCTTATGACGCGGGTTGTGCAGATTCTGAATGGTGTGGATGGACCTGTCGTAGAGCGGAAACAAAAATCACTGTTGCTAGAAGCCTGTGATTTGGAAGGCTACACTTGCTCTAATTACTTGAGTGACCTCCATCGTCATAGGCAATTACTGATGGAGTGA 411 0.4574 MHGIVDEKTDVFAYGVLLLELITGRRAVDSSRQSLVIWAKPLIDSHNVKELVDPRLGDDFDPNEMNRAMLTASMCMDHKSSERPLMTRVVQILNGVDGPVVERKQKSLLLEACDLEGYTCSNYLSDLHRHRQLLME* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00343 136 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Pte11g00343 136 PANTHER OS08G0249100 PROTEIN 1 107 IPR046958 -
Pte11g00343 136 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00343 Pte-Chr11 3630245 3630848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00343 3 132 Trihelix Transcription Factor Family AT5G38560 38.411 2.32e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte11g00343 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00343 - - mcha:111008359 206.453