Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00342 ATGGGGGTATTGAACAGAATGGAAGCTACAAACGTTCTGGGTGCAAACCTCACCATGTCCGAGGAAGAGACCAGAGGAAGTGGACAGATAATGGACAAGGCAGATATGGGACCTCAGGTTGAAGAGAGAAACGAATTCGTATGGAAGGATGAGTGTTCACCACAAGATGATGTTTCACCAAGATGTGTACTGGAAAATCCAATATTAGGTACAGACTTTGACAACAGCGGTAGCAGCATGATCAGCTCTCTTACACCTGACAAATCGTCCAGTCAAGGTGCACAATGGAAGACTGCATTTGATGTCCTCAAGAAGAAATCTCTCAGAACATTTGCAACCATTCCTTTGCTGGCTGCCAGCTATGAGATCTCCAGGAAGAATTTGAGGAGGAAATTGGCTCGAATTAGAAGTGCTGAAGAAGACATTGATCTTGGGGATATTCCTATCGCAAAGCCCTCATGGAGGAACTTCGGTCATGCAGAACTTTCATCTGCAACCAACAATTTTAGTCCAGAGAACATGATTGGGAAAGGAGGCAATGCTGAAGTTTACAAGGGATTCCTATCTGATGGTCAAGAAGTAGCTATAAAGAGGCTGATGTTGATAGATAAGGAAGAAGCAGATAGAACCCGCGACTTTCTGTCAGAGCTTGGGATTATAGCACATATTAATCACCCCCGTGCAGCAAGATTGATTGGTTACGGAGTGGATGGTGGATTGCACCTTGTCCTTCAATATTCACCACACGGCAGCCTTGCCTCTCTGCTTTTTGGTCCTCTATCTTTCCCTTGCTACTCAATTAATCCGTTTCTTCAAATAAGTTGCTTCCTATTAATCAAATACCTACAAAAGGACCATGAGTTGTAA 867 0.4371 MGVLNRMEATNVLGANLTMSEEETRGSGQIMDKADMGPQVEERNEFVWKDECSPQDDVSPRCVLENPILGTDFDNSGSSMISSLTPDKSSSQGAQWKTAFDVLKKKSLRTFATIPLLAASYEISRKNLRRKLARIRSAEEDIDLGDIPIAKPSWRNFGHAELSSATNNFSPENMIGKGGNAEVYKGFLSDGQEVAIKRLMLIDKEEADRTRDFLSELGIIAHINHPRAARLIGYGVDGGLHLVLQYSPHGSLASLLFGPLSFPCYSINPFLQISCFLLIKYLQKDHEL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00342 288 ProSiteProfiles Protein kinase domain profile. 169 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00342 288 Coils Coil 118 141 - -
Pte11g00342 288 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 145 246 - -
Pte11g00342 288 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Pte11g00342 288 Gene3D Phosphorylase Kinase; domain 1 130 246 - -
Pte11g00342 288 Pfam Protein kinase domain 172 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00342 288 SUPERFAMILY Protein kinase-like (PK-like) 155 259 IPR011009 -
Pte11g00342 288 PANTHER OS08G0249100 PROTEIN 42 258 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00342 Pte-Chr11 3627168 3629653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00342 157 258 Receptor kinase-like Gene Family AT1G53440 41.748 3.39e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte11g00342 Pkinase 7.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00342 - - qsa:O6P43_033250 290.041