Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00341 ATGGCTACAACCCCAGCAAGCTTTGAACTGCTATCACGGGAATCTGTTAAACCATCCTCTCCAACACAGACAAAGCTCACAATTTATCGCTTAAGCTTTTTGGATCATCTTCGTGCTTTCATGTATGTGCCGATAATTTTCTTCTACTCCATGAAGAAGATTCCGGATACCGACACCGTAGTCGAAGTTTATGCAGAAAAAAGCCAAAAGCTTAAGCAATCTCTATCTGAAGTACTCACACGTTACTATCCTTTTGCTGGTAGGTTCAAAGATTTGTTTTCCATTCTCTGTAACGACGAGGGAGTGACGTTCCTAGTGGCTAGGATAAAACAGAAACATTTGTGTGAAATATTAGAGAACCCTAAGGATGAATTTCTCCAACTTATGTTTGCTGATCAACTGCACTGGAAGGGAATGGAATCTAATGCTAGTAGTATCTTGGCTATTCAGGTCAACTTCTTTGACTATGGAGGAATAGCAATTAGCATTTGTATATCGCACAGAATTGCTGATGCTTGTACCATGATCAACTTCATCGGAGATTGGTCAAAATCATGTGGGAACTTTGGTGATCAACAGGTCTCTCCTGTACTAAATGCAGCTTCCGTTTTCCCTCATGGTGAATTGCCGACATTCCAGATACCAATGATACCAGAAGGGGAGTCTCTGTGCAAGAGGTACATGTTCGAGGCATCAAAAGTAGATGCTCTCAAGTTCATGGTATCTAAAAAAGTGAAAGATCCTTCAAGGGTACAAGTTGTGGCTGCTTTCCTTTGGAAACGTATAGTGTCTGTTTCGACTGCATCAGATTCTACACACCCAGAAGAAGCCACAGAAACCATATTAATGCAACCAGTGAACTTGCGCACCAGGATGGTACCTCCACTTCCTCTAAGTACCGTGGGAAATATATTAGCCATGTGCGAAACATCTTGCAGCATGGGACAGAGCACGACTGATAACGAGCTGCAAAATGTAGTGATCGAAATGAAACAGGCCTTTGTGAAATTTTGCAAAACACATGAGAAATTGTTTACAGAGAAAGACATGTCCTCCTTGATCCCCAAGCCTCCAAATCAATGTATGAAACTGGAAGGGGACAAGTTTCCTTTAGTGTGTATAATGTCCAGCTGGTGCAGGTTCCCAATATACGAAGTCGATTTTGGTTGGGGAAAGCCAATATGGGTGACTACTGCAGGCAGCGGTATCAGGAACTTTGTGGTTTTGATGGATATGAGAGATGGGAAAGGAATACACGCAGTTGTGAGCCTTGAACCGAAAGAAATGGCAGCATTCGAGTGTGACAAGGAGCTACTTGCTTATACATCAACGTTGATCAATGCTGGAACATGCATGTGTGGTTAA 1365 0.4242 MATTPASFELLSRESVKPSSPTQTKLTIYRLSFLDHLRAFMYVPIIFFYSMKKIPDTDTVVEVYAEKSQKLKQSLSEVLTRYYPFAGRFKDLFSILCNDEGVTFLVARIKQKHLCEILENPKDEFLQLMFADQLHWKGMESNASSILAIQVNFFDYGGIAISICISHRIADACTMINFIGDWSKSCGNFGDQQVSPVLNAASVFPHGELPTFQIPMIPEGESLCKRYMFEASKVDALKFMVSKKVKDPSRVQVVAAFLWKRIVSVSTASDSTHPEEATETILMQPVNLRTRMVPPLPLSTVGNILAMCETSCSMGQSTTDNELQNVVIEMKQAFVKFCKTHEKLFTEKDMSSLIPKPPNQCMKLEGDKFPLVCIMSSWCRFPIYEVDFGWGKPIWVTTAGSGIRNFVVLMDMRDGKGIHAVVSLEPKEMAAFECDKELLAYTSTLINAGTCMCG* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00341 454 PANTHER F21J9.9 9 443 - -
Pte11g00341 454 Pfam Transferase family 9 438 - -
Pte11g00341 454 Gene3D - 221 442 IPR023213 -
Pte11g00341 454 Gene3D - 7 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00341 Pte-Chr11 3623107 3624471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00341 13 433 Monolignol Biosynthesis Gene Families AT5G48930 23.789 2.20e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00341 - - qsa:O6P43_023903 378.637