Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00339 ATGGCTCGTCATCATCAGAGCACAGACACTGTGATAAACATCGGAAAGACAGTCAATTTTGCTGGCGGGATTGAATTTTCAGCTCTCACATACACAGTCACAAAGCAAAAGAAGGTTGAAGGCCGGTGGGAGAAGCAGGATGTGGACTTGTTGCATAAGATCACAGGCTATGCACCCAAAGGCTGTGTCACTGCTGTCATGGGTCCTAGTGGCGCCGGGAAGTCCACTTTCTTGGATGGTTTGGCCGGAAGAATTGCAAGCGGCAGCCTTAAGGGCAGAGTTTCTTTAGATGGTGCAGAAATGAGCCCAAGCTTGATCAAAAGAACTTCTGCCTATATCATGCAGGATGATAGACTTTTTCCGATGCTCACTGTCTATGAGACGTTCATGTTCGCTGCTGATTTCCGGCTTGGACCACTGTCAACTGCTGAGAAGAAGGTTCGTGTGGAGAAGCTCATTGACCAACTTGGCTTGTCGTCGTCTAGGAATACTTACATAGGAGATGAAGGGACTCGAGGTGTCTCTGGTGGCGAGCGTCGCCGAGTCTCAATCGGTGTGGACATCATTCATGGACCGAACTTGCTTTTCCTTGATGAGCCGACTTCAGGTCTAGACTCCACCAGTGCTCACAGTGTTATTGAAAAGGTGCATCACATAGCACGCTCTGGTAGCACTGTGATTCTCACAATTCATCAGCCTTCATCGAGAATCCAGTTGCTTCTAGATCATCTGATCATTTTAGCAAGAGGGCAGCTCATGTTTCAAGGATCGCCTAAAGATGTGAACCTTCATCTTAGCCGTATGGGTCGAAAGTTTCCCAAAGGAGAGAACCCCATAGAGTATTTCATTGACGTGGTTCAAGAGTATGATCGGTCAGAACTTGGAGTGGAAGCACTGGCTGAGTTTGCACGTACTGGATTAAAGCCTCCTCCTTTGTCTGAAGAACAGGAGATGTCACTTTCTACTGTTGCACCATTGCCCACTCCAACTCCACGGTCAGAGAAACGCCGATCTACAGCTCCTACTCTAGATGATTTTGATCACAGTGTGAGAAGTCCATATAATACATCAAAATCATGGAGTGCTAGCCATGGTGGTGTTGTTCAAGCACTAAGACTCACCCCATCAAGGCTAAAGAACAATCAAAAGGTGCAGATCCCCATGAGTTCGTCTCCTGGATACTACACATACTCGAGTGAAATTCTTCCGGGGACTCCTACACCACATAGCAGTGACTATACAGTGAATGAGAATGATTATCTCACACCCAGTGTTGCTCCAAATTCTGGAACCCATTTTCTTGGTCCGAAATTCGCGAACTCATTCTTTTCAGAGACCTGGATCCTGATGCGCCGGAACTTCATAAACATCAGGCGTACACCTGAGCTTTTCCTATCTAGGCTAATGGTGCTGACAGTCATGGGGTTTATGATGGCCACCATGTTCAAAAACCCCAAGGATGACTTGCAAGGAATCACAAACCGGCTCAGCTTCATGATCTTTACAGTTTGTCTTTTCTTCTTTTCTTCCAATGATGCAGTGCCTGCTTTCATTCAGGAACGCTTCATTTTTGTGCGCGAGACTTCCCACAATGCTTATAGAGCTTCCTCCTACACAATTGCTGGCCTAATCACTTACTTGCCCTTCCTTGCTCTGCAAGCCGCTGTCTATGCTGTCATAGTCTGGTTTGCTTTGAAACTCCGTGGACCGTTCATATACTTCTTGATTGTTCTTTACGTTTCACTTCTTTCAACGAACTCATTTGTTGTGTTTGTGAGTTCGGTGGTGCCAAATTACATCTTGGGTTACGCTGCAGTCATTGCATTCACCGCTCTGTTCTTCTTGTTTTGTGGATACTTCTTGAATAGCGAAGACATCCCAGCCTATTGGGTCTGGATGAACAAAATTTCCACAATGACATATCCTTATGAGGGCCTATTGATGAATCAGTATCAGACATCTGATGTGTTTGGATTTAATAGTGATGGTTCGCTGGTCACTGGTTTCAAAATCTTGGAAAGCCTTCACATTGATTCCCAAGAGTTCAAAAAGTGGGAAAATGTGCTAATAATGTTGGGTTGGGCTGTGTTCTATAGGATTTTATTTTACTTGATTCTTCGATTTGCATCCAAGAACCAGAGGTCTTAG 2148 0.453 MARHHQSTDTVINIGKTVNFAGGIEFSALTYTVTKQKKVEGRWEKQDVDLLHKITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGRVSLDGAEMSPSLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLSTAEKKVRVEKLIDQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPNLLFLDEPTSGLDSTSAHSVIEKVHHIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVNLHLSRMGRKFPKGENPIEYFIDVVQEYDRSELGVEALAEFARTGLKPPPLSEEQEMSLSTVAPLPTPTPRSEKRRSTAPTLDDFDHSVRSPYNTSKSWSASHGGVVQALRLTPSRLKNNQKVQIPMSSSPGYYTYSSEILPGTPTPHSSDYTVNENDYLTPSVAPNSGTHFLGPKFANSFFSETWILMRRNFINIRRTPELFLSRLMVLTVMGFMMATMFKNPKDDLQGITNRLSFMIFTVCLFFFSSNDAVPAFIQERFIFVRETSHNAYRASSYTIAGLITYLPFLALQAAVYAVIVWFALKLRGPFIYFLIVLYVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLNSEDIPAYWVWMNKISTMTYPYEGLLMNQYQTSDVFGFNSDGSLVTGFKILESLHIDSQEFKKWENVLIMLGWAVFYRILFYLILRFASKNQRS* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00339 715 FunFam ABC transporter G family member 6 34 272 - -
Pte11g00339 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 262 IPR027417 -
Pte11g00339 715 Pfam ABC-2 type transporter 231 287 IPR043926 GO:0140359
Pte11g00339 715 Gene3D - 32 268 IPR027417 -
Pte11g00339 715 MobiDBLite consensus disorder prediction 307 349 - -
Pte11g00339 715 MobiDBLite consensus disorder prediction 315 336 - -
Pte11g00339 715 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Pte11g00339 715 Pfam ABC-2 type transporter 446 651 IPR013525 GO:0016020|GO:0140359
Pte11g00339 715 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 703 - -
Pte11g00339 715 SMART AAA_5 60 258 IPR003593 GO:0016887
Pte11g00339 715 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524|GO:0016887
Pte11g00339 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 274 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00339 Pte-Chr11 3611326 3614240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00339 19 288 Calmodulin-binding Proteins AT2G36910 25.547 2.97e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00339 K05681 - qsa:O6P43_033300 1151.35