Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00330 ATGGGAGACGTTGCTAAAGACCTTACTGCGGGTACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTCGACACCATTAAGGTGAAGCTGCAAAGTCAACCTGCAGCGCTTCCTGGTCAACGTCCGGTGTACTCAGGTGCAATGGATGCTGTCAAGCAAACATTAGCTGCCGAAGGATCCAGGGGTCTGTTTAAAGGTATGGGTGCTCCACTTGCTACTGTGGCAGCATTCAACGCCGTTCTCTTTGCAGTAAGGGGACAGATGGAAGCATTGTTAAGGTCTCATCCTGGTGCTTCCCTTTCAGTTAGCCAACAGTTCGTTTGTGGAGCGGGTGCTGGGGTTGCTGTTTCCTTTCTAGCCTGCCCTACTGAACTGATCAAGTGCAGGTTGCAAGCACAAACTTCAATGGCTGCTACTGACTCAGTCGGCGTGGCAGTGAAGTATGGAGGGCCTATGGATGTGGCCAGGCATGTGCTCAATTCAGAAGGTGGCACAAGAGGTCTTTTCAAGGGCTTAGTTCCAACCCTGGCACGTGAGGTACCCGGAAATGCTATAATGTTTGGCACCTACGAAGCGATAAAACAGTTGATTGCAGGAGGGAAAGACACTTCTGGTTTAGGGAAAGGCTCTTTGATGGTGGCCGGCGGCATAGCTGGAGCAAATGTGTGGCTCTTGGTGTACCCAATTGATGTCGTAAAGAGTGTGATTCAGGTAGACGATTACCAGAACCCAAAGTTTTCTGGAACATTTGATGCTTTTAGAAAGATTCGGGCATCTGAGGGGTTCAAAGGGCTCTATAAGGGCTTTGGTCCTGCAATTGCTCGAAGTATTCCTGCCAATAGTGCATGCTTCTTGGCATATGAAATGACAAGGTCTGCTTTGGGATGA 894 0.4955 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPAALPGQRPVYSGAMDAVKQTLAAEGSRGLFKGMGAPLATVAAFNAVLFAVRGQMEALLRSHPGASLSVSQQFVCGAGAGVAVSFLACPTELIKCRLQAQTSMAATDSVGVAVKYGGPMDVARHVLNSEGGTRGLFKGLVPTLAREVPGNAIMFGTYEAIKQLIAGGKDTSGLGKGSLMVAGGIAGANVWLLVYPIDVVKSVIQVDDYQNPKFSGTFDAFRKIRASEGFKGLYKGFGPAIARSIPANSACFLAYEMTRSALG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00330 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Pte11g00330 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Pte11g00330 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Pte11g00330 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Pte11g00330 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Pte11g00330 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Pte11g00330 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Pte11g00330 297 Gene3D Mitochondrial carrier domain 2 296 IPR023395 -
Pte11g00330 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Pte11g00330 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00330 Pte-Chr11 3494037 3495081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00330 22 291 Antiporters AT1G79900 32.130 1.65e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00330 K15109 - gmx:100787304 503.442