Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00327 ATGACAGACGGAAAATTACAAAATACTATGAATCTTTGGACTGATGACAACTCCTCCGTTGCAGAAGCTTTCATAACCTCTGATCTCTCTTCGTTATGGCCTTCGACACTTTCTTATACGCAACACCACCACCATCCTTCAATTCCGACAACTACAACAGATGCAGTTCTTGAACTCCTGAAAATTAATTCTCAATATCAACAGCCTCTTGCTGTTTTCCGTGAAGAAACTCTCCAGCAACGTCTCCAAGCAATTATTGAAGGTGCTAGTGAGAGCTGGACCTATGCTATTTTCTGGCAGTCCTCTTATGACTATTCTGGTTGTTCTGTCTTGGGTTGGGGAGATGGGTATTATAAAGGAGAAGAAGATAAAGTAAAGAGTAGAGCAAGAACGACTGCATCAGCTGCTGAGAAGGAGCATCGAAAAAAGGTTTTGAGGGACCTTAATTCCTTGATTTCTGGGTCTTCTCTTTCAAATGATACTAATACTATGGATGAGGAAGTTACTGAAACAGAATGGTTTTTTCTCGTTTCTATGGCACAATCTTTTGTGAACGGTTGTGGATTACTTGGTCAGGCACATGTCTTCGGGCTTCAAACAATGTTTTGTGTACCTTCTGCTAACGGTGTTGTTGAGTTGGGATCAACTGAGCTGATTTTCCATTGCTCGGATCTGTTGAACAAGATAACGGTTTTGTTCAATTTCGATAGTCCTGAAGTGGGTTCCTGGCCATTGAATACCTCAAGTACAGATCAAGGTGAGAATGAGCCATCATCTATTTGCATTAATAACACTCCTGTGATGAATAACTTGACTCCATCTTTAGTTCAAAGTGCTGCAACTAGCAACAGTCATGTACAGTCACCAGCAACGACAACAGACACAGACTTTTTTGCCAAAGAACTGAATTTCTCTGAATATCGATTTGATGGTTCTAGCGCAAGAGATGATAATACACATAATCTTAAGCCAAAATCAGATGAAATTTTGAATTTTAGTGAGAGTAACAATGAAGGATTGTATAATGCAAATGTGAACTTCTATCCAGATCAGTCTCAAGTCATTGCAGAAGATAATAGGAAAAGGAGGTCACCCACCTCTAGAGGCAGTAATGAAGAAGGGATGATGTCCTTTACCTCAAGCGTGATTTTACAGAACGCATATGCTTTAGGATCAGGTGGAAGTGGTGGGGATTCTAATCATTCTGATCTTGAAGCTTTAGTGATCAAGGAGGTAGATAGTGGAAGAGTATTAGAATCGAAAAAAAAGCCACGTAAGCGAGATCTGAAATCCAAGGTTAAAACTTTGGAGGTAGATAAGGAAGATTTACAGCAACAACTGGAATCAATGAAGAAGGAGCTCGAATTGGAAGAAAATGATCCACTGTATTCTGCTTCAAGGGTTCCTCCTCATGATCATGAACAGAAGATTTCAATTTTAATTGGAAGCAAGTTGAGAGATTTGGAAATAGAGGTGAAGATTATTGGTCGAGATGCAATGATTCGAATACAATGCAACAAGAAGAACTTGGGATCATTGCTCTTGGTCGAGATGCAATGA 1560 0.3974 MTDGKLQNTMNLWTDDNSSVAEAFITSDLSSLWPSTLSYTQHHHHPSIPTTTTDAVLELLKINSQYQQPLAVFREETLQQRLQAIIEGASESWTYAIFWQSSYDYSGCSVLGWGDGYYKGEEDKVKSRARTTASAAEKEHRKKVLRDLNSLISGSSLSNDTNTMDEEVTETEWFFLVSMAQSFVNGCGLLGQAHVFGLQTMFCVPSANGVVELGSTELIFHCSDLLNKITVLFNFDSPEVGSWPLNTSSTDQGENEPSSICINNTPVMNNLTPSLVQSAATSNSHVQSPATTTDTDFFAKELNFSEYRFDGSSARDDNTHNLKPKSDEILNFSESNNEGLYNANVNFYPDQSQVIAEDNRKRRSPTSRGSNEEGMMSFTSSVILQNAYALGSGGSGGDSNHSDLEALVIKEVDSGRVLESKKKPRKRDLKSKVKTLEVDKEDLQQQLESMKKELELEENDPLYSASRVPPHDHEQKISILIGSKLRDLEIEVKIIGRDAMIRIQCNKKNLGSLLLVEMQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00327 519 Coils Coil 426 460 - -
Pte11g00327 519 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 78 193 IPR025610 -
Pte11g00327 519 PANTHER MYC 428 509 IPR045084 GO:0003700|GO:0006355
Pte11g00327 519 MobiDBLite consensus disorder prediction 352 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00327 Pte-Chr11 3472029 3473919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00327 1 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 37.581 7.65e-95 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00327 K13422 - qsa:O6P43_025161 477.633