Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00306 ATGCGTATGGAGTTATTCCCAGCACAACCAGATTTGTCTCTTCAGATAAGCCCGCCAAATAGCAAGGCTACATCTAGTTGGAGAAGAAGTACTGTTACTGAAGATGATGTGGATTTGGGGTTCTGGAAGAGAGCTCTGGACTCAAGAAACTCCATGTCTTCAATGGCCAAAGCTGATAGCTGTTTTGACCTCTCACTCTCCAATCCAAGAGCTTCGGATTACTCTACTACCCCCAACATCCACATCAATGTTCACCACTTCCCAAACGTTAGTCCCAGCCCCCTCCAGTCAGTACAGTTACAACAAAACCACTGTGCTCAGTTTCGGCATCATCAGCCACAGCTATACCAGCAACTCCAGCCACAAGAAGTACATCACGGGTATGGCGGGCTAAGCAAAGAGCTGGGCTTTTTGAGACCCATTAGAGGGATTCCAGTCTACCCAAACTCTCCTCCTTTTCCGTTTGCTCAACAATCATCCTCAGAAGCTTCCACACCATCATCTATAGCTAACTGTAGTACAAATCCTAGTATAACCGGTTCAATTCCTTTCTCCTCTAATGGCCTGATGAGATCGAAATTTCTTTCACGTTTTCCAGCTAAACGTAGCATGAGAGCCCCTAGGATGCGTTGGACAACTACCCTCCATGCTCGGTTTGTTCATGCCGTTGAGCTTCTTGGAGGCCATGAAAGGGCTACTCCCAAATCAGTTCTTGAACTCATGGATGTCAAAGATCTCACTTTGTCACATGTTAAATCCCATTTACAGATGTACCGGACAGTGAAGACCACCGATAGAGCAGCTGCAGCTCCTTGTGGGCAACAGGATCTCTACGATAATGGTTCGTGTGGAGATAATTCGGAAGACTTATTAATTTTTGATGTTCACAACTCAAGAAGAATTGAGCTTCCTGGGCAACAGAAAAGACAAAGTTGTACTCCAGATAAGGATTATCAAGGCCTTTGGAGCAATTCTTCAAGGGAACCTTGGTTGCATGGTGAGACAAGGGATTCTGCTGCAAACATGCAAACCCTTGAGAAAGACGTGGACTCAAAGTGTCAAAGCTATGACAAAGGGTCAGAAGGGAGCACATCCACAACCCATTCGGGAACAAGCTCCAAGAGACGTCTTAATTTGGATTTGGAGTTCACGCTGGGGAGGTCACACTGA 1170 0.4598 MRMELFPAQPDLSLQISPPNSKATSSWRRSTVTEDDVDLGFWKRALDSRNSMSSMAKADSCFDLSLSNPRASDYSTTPNIHINVHHFPNVSPSPLQSVQLQQNHCAQFRHHQPQLYQQLQPQEVHHGYGGLSKELGFLRPIRGIPVYPNSPPFPFAQQSSSEASTPSSIANCSTNPSITGSIPFSSNGLMRSKFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKTTDRAAAAPCGQQDLYDNGSCGDNSEDLLIFDVHNSRRIELPGQQKRQSCTPDKDYQGLWSNSSREPWLHGETRDSAANMQTLEKDVDSKCQSYDKGSEGSTSTTHSGTSSKRRLNLDLEFTLGRSH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00306 389 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 388 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pte11g00306 389 MobiDBLite consensus disorder prediction 304 332 - -
Pte11g00306 389 FunFam Myb family transcription factor 205 263 - -
Pte11g00306 389 MobiDBLite consensus disorder prediction 349 375 - -
Pte11g00306 389 MobiDBLite consensus disorder prediction 13 28 - -
Pte11g00306 389 MobiDBLite consensus disorder prediction 1 29 - -
Pte11g00306 389 NCBIfam myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Pte11g00306 389 MobiDBLite consensus disorder prediction 356 375 - -
Pte11g00306 389 MobiDBLite consensus disorder prediction 304 329 - -
Pte11g00306 389 Gene3D - 206 263 - -
Pte11g00306 389 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
Pte11g00306 389 SUPERFAMILY Homeodomain-like 204 260 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00306 Pte-Chr11 3330056 3334776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00306 139 387 G2-like Transcription Factor Family AT5G16560 41.860 3.14e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte11g00306 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00306 - - qsa:O6P43_025117 453.366