Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00301 ATGGGAGAAGAAGCTGAGGCGGCAGAACAGGAAGCTCTGAGACTCAAGTCCCTTGCAGAAACCAAATACAAAGAGTCCAAACTTAAGTCAGCTCTCAAATACGCGAAACGAGCTCAATGTCTTTCACCGAACCTCGATAGTATTTCCGAGATGGTCACCTCCTTCAAAATTCTTCATGTTGGCTCCAGGTCATTCACTACCCCCGACTGGTACAAAATTCTTCAAGTAGAGCCTTTTGCTCATGTCAACGCTATTAAGAAGCAGTACAAGAAGTTGGCTTTGATTCTTCATCCTGATAAGAATCAATATGTCGGTTCTGAAGAAGCTTTCAAGATTGTAGGTGAAGCATTTAGCTTTTTGTCTGACAAGGTTAGAAGGAAAGAGTATGATATGAAACTTAGGATTCGTATGCAAGAGGAGGCTACTGCCGTTTTGAAGGATGTTGAAACGTTTTGGACTGCGTGTTCTACTTGTAGATTGTTGCACAAGTTTGAGAAGAAATATGTGGGTCATCATTTGGTATGTCCTATTTGTAAGAAGAGTTTTAAGGCTGTGGAGGTTGAGGATTATGACTCAGATGGGGAGGGAACTAGGCATAGGGAAAGGAGTGCGAAACTAAGAAATATGGATTTGCAGCAGAACGGGAGCCGTGTGAGAAGATTTGGAGATGAGGGTTTCAAAGGAATAGAGTGTAGTGATGAGAAATTGCTAAGTTTGAAGGAGAAAATGAGGAGGGGAAAAGAAATGGGGGGTGGAAATCATACAAATTCGAGAGGGAAATCTACTGGTGATGGTGGTGATGTGAGGAATAGTCATTCGGTGGGAGTGATTGGTAATAGTGAATGGACTGGAGGGAGGTTGAGAAGCCGGGTTGGGAAAAGAAGAATGAGTACTGTTGATGACTTGTTGGAAAGGTCTGACCTGAAGAGGGACAAAACTGGAGAGGCAATGATGACTTTAGCTGAAATGCGGGCCGAAGCGAAGCGTAAGGCTCAGGACCGCAGGATGAAATTGATGGTAAAGGAAAAGGGAAAGGAGCAAGGCAAAAAAAACAAGGGTAAGGAAAAGGGTAGACATGAAGTATTGAAGACTTGCCAGAATAATGAAAAGAGGAAATGTTCGAAAAAGAGTGGGAGGTTAGTTAGCAAGGAGAAGAATCTGGATTTGGAGTTTGATAAATTGAGGAGTTCAAGTAATGGGGATTTGGAAGTTATGGAAGTAGAAGATTCAGACTTCTATGATTTTGACAAAGATAGGGTTGAAAAGAGTTTTAAGAAAGGGCAAGTGTGGGCGATATATGATGATGATGATGGAATGCCTAGAAATTATGGTCTAGTTGATGAGGTTATTTCTCTGAACCCATTTGCATTGAAAATAAGCTGGTTAGACTTGGTGAAAAGCGGGAATGAGGGAATTATCTCGTGGGAGGAAATGGGGTTTCATATATCATGCGGGAGATTTAAAATTTTCAGGACTACATCCATCTACTTGCTGAATATTTTTTCCCATGTTGTAAATTGTGAGCAGGCAGCACGTGATGTGTATAGAATTTATCCGAAGAAGGGTTCAGTCTGGGCTCTTTATGGTGAAGCAACATTGGGGGAAATGAAGGCTACTGCTGGGAACAGAAGATGCTATCACATTGTTGTAGTTTTGACAAGTTACAGTGACATACATGGTCTAAGCATTGGATATCTTGAGAAAGTTGATGGGTTAAAAACTATATTTAAGAGGAAACAGATTGGTTTTCATGCAGTGACATGGCTTGAAAATGATGGCATACGTTTATTTTCACATCAGATTCCTGCTCAGAAACTTTCCGGAGATGACATCCCTGAACTTCTGAAAGACTGTTGGGAACTTGATCCCGCCTCGCTTCCTTCAGATTTACTAGCTATACAGGGAGGATGA 1911 0.416 MGEEAEAAEQEALRLKSLAETKYKESKLKSALKYAKRAQCLSPNLDSISEMVTSFKILHVGSRSFTTPDWYKILQVEPFAHVNAIKKQYKKLALILHPDKNQYVGSEEAFKIVGEAFSFLSDKVRRKEYDMKLRIRMQEEATAVLKDVETFWTACSTCRLLHKFEKKYVGHHLVCPICKKSFKAVEVEDYDSDGEGTRHRERSAKLRNMDLQQNGSRVRRFGDEGFKGIECSDEKLLSLKEKMRRGKEMGGGNHTNSRGKSTGDGGDVRNSHSVGVIGNSEWTGGRLRSRVGKRRMSTVDDLLERSDLKRDKTGEAMMTLAEMRAEAKRKAQDRRMKLMVKEKGKEQGKKNKGKEKGRHEVLKTCQNNEKRKCSKKSGRLVSKEKNLDLEFDKLRSSSNGDLEVMEVEDSDFYDFDKDRVEKSFKKGQVWAIYDDDDGMPRNYGLVDEVISLNPFALKISWLDLVKSGNEGIISWEEMGFHISCGRFKIFRTTSIYLLNIFSHVVNCEQAARDVYRIYPKKGSVWALYGEATLGEMKATAGNRRCYHIVVVLTSYSDIHGLSIGYLEKVDGLKTIFKRKQIGFHAVTWLENDGIRLFSHQIPAQKLSGDDIPELLKDCWELDPASLPSDLLAIQGG* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00301 636 PRINTS DnaJ domain signature 71 89 IPR001623 -
Pte11g00301 636 PRINTS DnaJ domain signature 89 104 IPR001623 -
Pte11g00301 636 PRINTS DnaJ domain signature 105 125 IPR001623 -
Pte11g00301 636 PANTHER BNAC03G44070D PROTEIN 8 627 - -
Pte11g00301 636 CDD DnaJ 69 122 IPR001623 -
Pte11g00301 636 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Pte11g00301 636 Pfam DnaJ domain 69 130 IPR001623 -
Pte11g00301 636 MobiDBLite consensus disorder prediction 245 283 - -
Pte11g00301 636 Gene3D DnaJ domain 59 157 IPR036869 -
Pte11g00301 636 ProSiteProfiles dnaJ domain profile. 69 133 IPR001623 -
Pte11g00301 636 MobiDBLite consensus disorder prediction 254 278 - -
Pte11g00301 636 Pfam Domain of unknown function (DUF3444) 404 609 IPR024593 -
Pte11g00301 636 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Pte11g00301 636 SMART dnaj_3 68 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00301 Pte-Chr11 3255479 3258994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00301 11 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.412 7.69e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00301 - - qsa:O6P43_033368 722.235