Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte11g00300 | ATGGGTAACAGTGATATGGAGAAAACTGCAAAAGATAAGGAATCGAAGACAACTCATTCCATTTCACAGGAGCAGCCTTCAACCACTACTACTGGCGCAGTTAACCCTGAGTGGTCAGGCTTTCAGGCATATTCTCCCATACCACCTCCCGGGTTCTTGGCATCAAGTCCCCAAGCTCACCCATATATGTGGGGTGTTCAGCACATTATGCCCCCATATGGTACTCCTCCTCATCCCTATGTTGCAATGTATCCCCCTGGTGGCATATATGCTCATCCATCCATTCCTCCGGGATCTTATCCATTCAGTCCATTTGCCATGCCTTCAAATAGTATTCCTGATGCTACTGGTAATACTCCTGGAACTATGGAAGCAGATGCAAAAACTCCAGAAGTGAAGGAAAAATTGCCTATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGCAAAAATAGTGAACATGGCAAAATGTCTGGGACGTCTGCCAATGGCATGCATTCAAAAAGTGGTGAAAGTGGTAGTGAAGGTTCTAGCGAAGGAAGTGATTCAAATTCTCATAATGACTCTCAACATAAGTCAGGGGAAAGACAAGATTCATTAGAAGCTGAAACATATACCGTGCTGGTTACTGCAGAACCAGGTCAGAATGGTAATTCTCCACATGCTTCTCAGAATGGCATACCAAATACACCTCATTCAATGGTCAATCAAAAAATGAGTATTTTACCTATATCTGCTGCTGGTGCTCCTGGAGCTGTTCCTGGTCCTACTACAAACTTGAATATTGGTATGGACTATTGGGGTACTCCGACAACGTCTTCCATCCCTGCAATGCTGGGGAAAGTTTCTTCTGCTCCTGTTACTGGAGGGATAGTTACAACTGGTTCCCGAGACAGCTCGCAACTCTGGATACAGGATGAAAGGGAGCTTAAAAGACAGCGGAGAAAGCAGTCAAACAGAGAATCTGCACGTCGGTCAAGGTTGCGTAAGCAGGCTGAATGTGATGAGCTGGCTCAGCGTGCCGATGTATTGAAAGAAGAAAATGCTACTCTTAGGACAGAACTGGGTCGAATCAGGAGTGAGTATGAGCAGCTTCTTGCAAAAAACGCATCCCTAAAGGAAAGACTTGGAGAGGCTCCAGGCATTGAAGATCCTAGGGCTGATGGAAAGGATCGAAACTTGCGTAATGATATTGAAGAAACTAGGAAGAAGGAAGTGTAA | 1233 | 0.4461 | MGNSDMEKTAKDKESKTTHSISQEQPSTTTTGAVNPEWSGFQAYSPIPPPGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPSNSIPDATGNTPGTMEADAKTPEVKEKLPIKRSKGSLGSLNMITGKNSEHGKMSGTSANGMHSKSGESGSEGSSEGSDSNSHNDSQHKSGERQDSLEAETYTVLVTAEPGQNGNSPHASQNGIPNTPHSMVNQKMSILPISAAGAPGAVPGPTTNLNIGMDYWGTPTTSSIPAMLGKVSSAPVTGGIVTTGSRDSSQLWIQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENATLRTELGRIRSEYEQLLAKNASLKERLGEAPGIEDPRADGKDRNLRNDIEETRKKEV* | 411 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 145 | 188 | - | - | |
| Pte11g00300 | 410 | Pfam | Disordered region downstream of MFMR | 134 | 280 | - | - | |
| Pte11g00300 | 410 | Pfam | G-box binding protein MFMR | 1 | 96 | IPR012900 | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 20 | 38 | - | - | |
| Pte11g00300 | 410 | Coils | Coil | 331 | 379 | - | - | |
| Pte11g00300 | 410 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 318 | 333 | IPR004827 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 402 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 189 | 203 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 381 | 410 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Pte11g00300 | 410 | Gene3D | - | 314 | 369 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 312 | 335 | - | - | |
| Pte11g00300 | 410 | CDD | bZIP_plant_GBF1 | 316 | 366 | IPR045314 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | SMART | brlzneu | 311 | 375 | IPR004827 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | Pfam | bZIP transcription factor | 311 | 373 | IPR004827 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | SUPERFAMILY | Leucine zipper domain | 314 | 370 | IPR046347 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 313 | 376 | IPR004827 | GO:0003700|GO:0006355 | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 377 | 410 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 117 | 238 | - | - | |
| Pte11g00300 | 410 | MobiDBLite | consensus disorder prediction | 213 | 238 | - | - | |
| Pte11g00300 | 410 | FunFam | BZIP transcription factor | 313 | 364 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte11g00300 | Pte-Chr11 | 3249604 | 3254373 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte11g00300 | 1 | 387 | bZIP Transcription Factor Family | AT2G35530 | 61.965 | 1.23e-160 | 456 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | bZIP | Pte11g00300 | MFMR_assoc | 1.4e-53 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte11g00300 | K09060 | - | vvi:100243644 | 602.438 |