Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00299 ATGGGTTATGAAAACGATCCGTATCGCGATGAGGACGGAGAGTTATTGATGGACTACGATGATGTGCAATCGGATCGTGAGCCATCGCCCGAACCTCAGCATGAGCTTTACCACGATCTGGAAGAAGATGCCGACGATTTGCGCAATCGCGAACGGTCTCAGACGCCAGTTTATGATAACAGTGAAGCGTCGGCGTCAAAGTCGAAACCGAGGAAGAGGTTGATTAAAAAAGGTGACTTTGGTGACCGGGGTGTAGCTCAGGATCTCGATGAGGAGGATGGTGGTGTTCCAATGAGTCATGTGAGGGATCGATCGGAGGATATGGAAGTTAGGAAGAGGAAGATGGAAAAAGCTAGCGGGAGTATTGGGAGAAAGGGGGAGAGGATGAAAGGAGAAAAGAAGTTTGGAAGTAGTGGGAAGTCGAAATTTGGTACTTCTGCTATGAAAGGAGGCGGAGATCACGATGGTGAGGTGAAGGAGATGTGGGATACAATTGCTGGAGGTGATTCAGAGGATGATCGAGAAGGTGCCAGGAACGCTTATGATGATAACTTTATTGATGACAGCGGTGTGGATCCTGCTGATCGCTATGGTAGTGACCACGAGCATTCTCCTGGTCGGGCACCTCAGGCCGAAGAAGGTGAAGAGGATGAAGAGATCGACCAGCTCTTCAAGATGGGTAAGAAAAGGAAGAAGACTGAAAGAAATCCTGCAGATATAGCACTATTAGTTGAGAATGTTATGGCTGAGCTTGAGGTCACTGCTGAAGAAGATGCTGAGCTTAATAGACAAGGGTTGCCTGCAATCAACAAACTCAAAAAATTGAATCTCCTCACGGAAGTTCTAACAAAGAAACACCTTCAGCAAGACTTTCTAGATCATGGAGTACTGACTTTATTGAAGAATTGGCTTGAGCCTCTCCCAGATGGAAGTTTACCAAACATAACCATCCGCTCTGAAATAATGAGGATTTTGAATGAGCTTCCTATAGATCTAGAACAATATGATAGAAGGGAACAGTTGAAGAGGAGTGGCCTTGGAAAGGTCATTATGTTTTTATCAAAAACAGATGAGGAGACTGGCTCAAACCGAAAACTTGCTAAGGAACTGGTGGATAAATGGAGTCGGCCTATATTTAACAAGAGTACAAGATACGAAGACTTGAGAAATATGGAATATGAGAGGGCTCCATATAGAAGGCCTTCAGCGAAGAAGCCCGGAAATAAAACTCCAGGAATGGAATCTAGGGATGGCGATCTTGATTTGGATGAGTTTTCAAAGAGAAAGTCTAGCCAACCCTCTTCCAGACAGCATACAACTAGACCAGAAGCAACGCCTTTGGATTTTTTTGTGCGCCCCCAATCTAAGATTGACCCAGAGGAAATCAGAGCCCGTGCAAAACAAGCTGGTCAAGATCAGCACCGAATGAAGGTGGGCTGTCCTTCGTTGTACGCCCTTATACAAGAACCAAAATTTTGTCGCATAGTGCTATTGTTTTTGGCTTCTTTATTTAAGCTCGTTCATTTGCAGATGAATAAAAAGTTACAGAAGTTGCGGGCGCCCAAGAAAAAGCAACTTCAAGCCACAAAACTTAGTGTTGAAGGTCGTGGCATGCTCAAGTACTTGTAA 1629 0.4481 MGYENDPYRDEDGELLMDYDDVQSDREPSPEPQHELYHDLEEDADDLRNRERSQTPVYDNSEASASKSKPRKRLIKKGDFGDRGVAQDLDEEDGGVPMSHVRDRSEDMEVRKRKMEKASGSIGRKGERMKGEKKFGSSGKSKFGTSAMKGGGDHDGEVKEMWDTIAGGDSEDDREGARNAYDDNFIDDSGVDPADRYGSDHEHSPGRAPQAEEGEEDEEIDQLFKMGKKRKKTERNPADIALLVENVMAELEVTAEEDAELNRQGLPAINKLKKLNLLTEVLTKKHLQQDFLDHGVLTLLKNWLEPLPDGSLPNITIRSEIMRILNELPIDLEQYDRREQLKRSGLGKVIMFLSKTDEETGSNRKLAKELVDKWSRPIFNKSTRYEDLRNMEYERAPYRRPSAKKPGNKTPGMESRDGDLDLDEFSKRKSSQPSSRQHTTRPEATPLDFFVRPQSKIDPEEIRARAKQAGQDQHRMKVGCPSLYALIQEPKFCRIVLLFLASLFKLVHLQMNKKLQKLRAPKKKQLQATKLSVEGRGMLKYL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00299 542 MobiDBLite consensus disorder prediction 152 182 - -
Pte11g00299 542 MobiDBLite consensus disorder prediction 19 55 - -
Pte11g00299 542 ProSiteProfiles TFIIS N-terminal domain profile. 298 381 IPR017923 -
Pte11g00299 542 PANTHER PROTEIN IWS1 HOMOLOG 1 1 478 IPR044204 GO:0009742|GO:0032784
Pte11g00299 542 MobiDBLite consensus disorder prediction 189 211 - -
Pte11g00299 542 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 237 384 IPR035441 -
Pte11g00299 542 MobiDBLite consensus disorder prediction 396 450 - -
Pte11g00299 542 MobiDBLite consensus disorder prediction 1 219 - -
Pte11g00299 542 Coils Coil 244 264 - -
Pte11g00299 542 MobiDBLite consensus disorder prediction 410 431 - -
Pte11g00299 542 MobiDBLite consensus disorder prediction 65 137 - -
Pte11g00299 542 Pfam TFIIS helical bundle-like domain 324 378 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00299 Pte-Chr11 3243364 3246987 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte11g00299 Med26 6.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00299 K17498 - qsa:O6P43_025102 688.723