Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00295 ATGGCCGCAACTATGAACAACCACTTCACCTGCCATGCAACAGACGACGAAGCCACCCCTCATACCACAGAAGCCTCACGATGTGGCCTTCACCCAAGCGCCTACCCAGATTGGTATTCACCAGAAACAGGAATTTACTATAGCAAACACCCTCCAATGCATCTTCCTTCAGACCCATTTCTTGATGCCGTTTCCTTTATATTCTCTCACAAACATAATGGGGTTTCAGCTCTCGTTGATTCCTCAACTGGCTATTCAATTTCTTACGGAGAATTTTTTCCTTTAGTGAAATCCATGGCTTCTGGCCTCCAACAATTGGGCGTTAAACATGGTGACGTAGTTTTGCTTCTACTTCCAAATTCCATTTACTATCCTATTATTTTCCTGGGTGCTCTGTATCTTGGTGCGGTAGTTACACCGATGAATCCTCTCAGTGCCGTGTCTGAAATCAGCAAGCAGGCGGCTGATAGTGGAGTTTGTTTGGCTTTTACTGTGTTAGAGAAAGTTGAGAAACTACAAGCATTAGGTATTCCTGCAATCTCGGTACCGGAAAATGTGAGTTCCATTCGAGAACCAAATCGGTTTTCAAGATTTTGGGAGCTTATTTCTGGTTGTTCTGATTTACTACAAAGGTCATTGATTAATCAGGAAGACCCGGCAGCTATAATGTACTCTTCAGGAACTACGGGAGTTAGCAAAGGAGTTGTTTTGACACATAGGAATCTTATTGCAATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCACAATACGAGAATACTAGCTGGAAGAACGTGTATCTAGCTGTTCTACCGATGTTTCATATATATGGATTCGCGCTCTTTGGAGCTGGGTTATTGTCTTTGGGATCTAGCATCGTAGTGATGAGAAAGTTTCAGATTGATGAGGTTGTCAAGGCGGTTGATAAGTATAAAGTAACCCACTTTCCCGTTGTTCCTCCAATTTTGACAGCTTTGACAAGGAGAGCAAAGGATGTCAGCGTAAGATGTTTGTCTAGTTTGAAGCAAGTTTCATGTGGTGCTGCACCTATAAGCAGAAAAGCAATTCAGGATTTTGTCCAGAATCTGCCTCACGTTGATTTTATTCAGGGTTATGGAATGACTGAATCGACTGCAGTAGGAACTCGTGGCTTCAATACAGGAAAGTGTCGCAATTATTTCTCAATAGGATTATTAGCTCCCAACATGCAAGCCAAAGTGGTAGACTGGAATACTGGTTCCTTTTTGCCCCCTGGCAGAAGCGGAGAGCTTTGCTTAAGGGGACCTGCAATCATGAAAGGATACTTGAATAACAAGGAGGCTACTATGTATATTATTGATGAAGGATGGCTGCATACTGGAGACATTGTTTACTTTGATCTAGATGGGAACCTACATTTATCTGATCGGTTGAAAGATATTATTAAATACAAGGGCTTTCAGGTCTCTCCAGCTGATTTGGAAGATGTGTTGATTTGCCATCCTGAGATAGTTGATGCAGCAGTCACGGCTATTGGGGATGACGAAATGGGGGAGATACCTGTGGGATTTGTTGTCAGAAGAGTTGGAAGTCAACTTTCTCAGGAAGACGTGATTGATTATGTTGCGAAGCAGGTTGCACCTCATAAGAAGATCAGAAGAGTGATTTTCACACACTCGATACCAAGGTCTGCCGCTGGGAAGATACTTCGTAGACAACTAAAGAACTCCACGACTTCTAGGCTCTGA 1725 0.4278 MAATMNNHFTCHATDDEATPHTTEASRCGLHPSAYPDWYSPETGIYYSKHPPMHLPSDPFLDAVSFIFSHKHNGVSALVDSSTGYSISYGEFFPLVKSMASGLQQLGVKHGDVVLLLLPNSIYYPIIFLGALYLGAVVTPMNPLSAVSEISKQAADSGVCLAFTVLEKVEKLQALGIPAISVPENVSSIREPNRFSRFWELISGCSDLLQRSLINQEDPAAIMYSSGTTGVSKGVVLTHRNLIAMVELFVRFEASQYENTSWKNVYLAVLPMFHIYGFALFGAGLLSLGSSIVVMRKFQIDEVVKAVDKYKVTHFPVVPPILTALTRRAKDVSVRCLSSLKQVSCGAAPISRKAIQDFVQNLPHVDFIQGYGMTESTAVGTRGFNTGKCRNYFSIGLLAPNMQAKVVDWNTGSFLPPGRSGELCLRGPAIMKGYLNNKEATMYIIDEGWLHTGDIVYFDLDGNLHLSDRLKDIIKYKGFQVSPADLEDVLICHPEIVDAAVTAIGDDEMGEIPVGFVVRRVGSQLSQEDVIDYVAKQVAPHKKIRRVIFTHSIPRSAAGKILRRQLKNSTTSRL* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00295 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 568 - -
Pte11g00295 574 FunFam 4-coumarate--CoA ligase 2 472 573 - -
Pte11g00295 574 Gene3D - 472 572 IPR045851 -
Pte11g00295 574 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Pte11g00295 574 Gene3D - 44 471 IPR042099 -
Pte11g00295 574 Pfam AMP-binding enzyme 71 476 IPR000873 -
Pte11g00295 574 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Pte11g00295 574 SUPERFAMILY Acetyl-CoA synthetase-like 72 568 - -
Pte11g00295 574 CDD 4CL 55 566 - -
Pte11g00295 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 47 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00295 Pte-Chr11 3201132 3204716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00295 36 575 Monolignol Biosynthesis Gene Families AT4G19010 61.496 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00295 K01904 - cave:132173726 782.326