Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00288 ATGCATAATAATCGTATCGGTAAAGAAGTTTGCAAGGCAAGGATGCTTACATGCATAGCATGCTCAAAACAAACGGGGGAAGATGGCGGAGAGGAAGGTCGTGCGCGTGACAGGGGCACACCAAGTACAAAAGAAGCTGTAAAGAGCCTCACGCTGCAGATCAAAGACATGGCGTCAAAATTTTCTGGTGCTTACAGACAATGCAAGCCCTGCATGGGATCTAGCAGCGACAGAAGAGAGCATAGACCTTACCCTGTTTCTTCTGACACTAAATCGGAGGGGGTGCCATACCTTTGTATGGAGACTGCACGTTCATCTTCAACCTCTGCTTGGGATTTCACTAGCGGCTCTCACCACCTTGCTAAAAGATCTGGTAACAGATTCATTGGTGCATTTAATGGTGACCGAACACCGAGAGAAAGGCAATCAGCATTTGCAACGTCTCCAGATGGAGTGGTAGAAGATAAGGATGAACCAAAGGAGTGGATGGCTCAAGTGGAACCTGGTGTTCATATAACTTTTATCTCCCTTCCTAATGGTGGAAACGATCTCAAAAGAATGCGCTTCAGCCGAGAGATTTTTAACAAATGGCAAGCTCAAAGATGGTGGGGCGAAAATTATGACCGAATCATGGAGCTCTACAATGTCCATAAATTCAATCACCAAGCTCTAAGCACTCCTACAAGATCTGAGGATGAGTGTAGAGATTCTTCTTACACAAGGTTAGGTTCCGCGAGGGAGAGCCCTATTGTGCCATACCCATACAAAGACTGGACACAAATACCCTATTACAGGCTTCCTGAAAGCAACGGGTATAACCCATCTGACCAATTAGAGCAAGGGGTTGCGCAATCACTCGAAGCATCGAGGACGACGACCTCCTCGAGGGATGAGCCTTCAGTCTCTGTGAGCAATGCCAGTGACGTTGAGGCAGAATGGGTTGAGCAAGATGAGCCAGGCGTATACATTACAATCAGACAGTTAAGAGATGGCACCCGTGAACTTAGACGTGTTCGATTCAGTCGAGATAGATTTGGTGAAGTACGTGCCAAGACGTGGTGGGAAGATAATAGAGAAAGAATTGAAGCTCAATACCTCTGA 1101 0.4659 MHNNRIGKEVCKARMLTCIACSKQTGEDGGEEGRARDRGTPSTKEAVKSLTLQIKDMASKFSGAYRQCKPCMGSSSDRREHRPYPVSSDTKSEGVPYLCMETARSSSTSAWDFTSGSHHLAKRSGNRFIGAFNGDRTPRERQSAFATSPDGVVEDKDEPKEWMAQVEPGVHITFISLPNGGNDLKRMRFSREIFNKWQAQRWWGENYDRIMELYNVHKFNHQALSTPTRSEDECRDSSYTRLGSARESPIVPYPYKDWTQIPYYRLPESNGYNPSDQLEQGVAQSLEASRTTTSSRDEPSVSVSNASDVEAEWVEQDEPGVYITIRQLRDGTRELRRVRFSRDRFGEVRAKTWWEDNRERIEAQYL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00288 366 MobiDBLite consensus disorder prediction 269 308 - -
Pte11g00288 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Pte11g00288 366 MobiDBLite consensus disorder prediction 27 43 - -
Pte11g00288 366 MobiDBLite consensus disorder prediction 25 44 - -
Pte11g00288 366 MobiDBLite consensus disorder prediction 73 87 - -
Pte11g00288 366 MobiDBLite consensus disorder prediction 133 157 - -
Pte11g00288 366 ProSiteProfiles BRX domain profile. 160 215 IPR013591 -
Pte11g00288 366 MobiDBLite consensus disorder prediction 72 93 - -
Pte11g00288 366 Pfam Transcription factor BRX N-terminal domain 40 71 IPR027988 -
Pte11g00288 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Pte11g00288 366 Pfam Transcription factor regulating root and shoot growth via Pin3 160 214 IPR013591 -
Pte11g00288 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 15 366 IPR044532 -
Pte11g00288 366 MobiDBLite consensus disorder prediction 270 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00288 Pte-Chr11 3108208 3112848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00288 12 367 Major Intrinsic Protein MIP AT1G31880 59.730 7.68e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00288 - - qsa:O6P43_025069 503.056