Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00287 ATGGATAGATACAAGTTAATCAAGGAAGTTGGTGATGGGACGTTTGGAAGTGTATGGAGAGCCTTAAATAAACAAACCGGTGAAGTTGTTGCCATTAAGAAAATGAAGAAGAAGTATTACTCCTGGGAGGAATGTGTAAATTTGAGAGAAGTGAAGTCATTGCGGAAAATGAATCATCCGAATATCGTGAAGCTGAAGGAAGTAAATAGAGAGAACAACATCCTTTACTTCATATTTGAGTACATGGAGTGCAACCTTTACCAGGTCATGAAAGACAGAGAAAAACCATTTTCTGAAGCTGAGGTGAGGAATTGGTGTTTTCAAGTGTTCCAAGGTCTAGCTTACACGCATCAGCGAGGATACTTTCATCGTGACCTTAAGCCAGAGAACTTATTAGTCAGCAAGGATGTTATCAAAATAGCAGATTTTGGCCTTGCCAGAGAAATTGGGTCACAACCTCCGTTTACGGAGTATGTGTCAACACGATGGTATCGCGCACCTGAAGTGCTGCTACAATCTTATGCTTATACTTCCAAAGTTGATATGTGGGCAATGGGTGCTATCATGGCTGAGTTGTTCTCTCTCCGTCCTCTTTTTCCTGGTGTGAGTGAAGCAGATGAGATCTACAAAATATGCAGCGTGATTAGTAGTCCAACAAATGAGTCATGGGCTGATGGGCTACGTCTTGCAAGGGATATTAACTACCAGTTCCCACAGCTTGCTGGTGTACATCTTTCTGTAATGATTCCTTCTGCAAGTAGTGATGCAATCAGCCTTATCTCATCACTTTGTTCTTGGGATCCATGCAAGAGGCCAACAGCCGTTGAGGCACTTCAACATCCATTTTTCCAGACTTGCTTCTATGTTCCTCCATCGCTTCGTCCAAGTGTTGCAGTCAACAGAACTCCTCCATCAGCTGGAATGAGGGTGTCGTTGGATCAAAATGCTGTTAAAAGATGCTCCGGCACTTGTAACGCAAAGCTTGCCAACAACTTCCCTTATCGTCAATCACATGTTCCTGTTGGTGCAGGTGTGCAACGCAAGCTGGATGCGGTAAACAGGGATATAAACAGTGTCGACAAGTTGAAGAAAGCTACTCAGCAACAAAGAAAATATCGACCACCTGGAAAGAACAGCCCAACGTCAGTTAACAGTGTGAGGAATGTGTGTGAAGTTTCAGAAGCATCTGATAAGTTGTCGAACATGACGATTGGAACTCGCAAGCCGTCTGTTGGCCAGCCACGACGACCCCCGCCTATGAAGGCCGGAGGTCACTGGATTTCTGAATCTCGCAGCTTATTGCCGAGCTCTGGAGAGATCGTTTCAGGCAGAAGCTATTCCAGAAAAATTGCCGGTTAG 1359 0.4444 MDRYKLIKEVGDGTFGSVWRALNKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVNRENNILYFIFEYMECNLYQVMKDREKPFSEAEVRNWCFQVFQGLAYTHQRGYFHRDLKPENLLVSKDVIKIADFGLAREIGSQPPFTEYVSTRWYRAPEVLLQSYAYTSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVISSPTNESWADGLRLARDINYQFPQLAGVHLSVMIPSASSDAISLISSLCSWDPCKRPTAVEALQHPFFQTCFYVPPSLRPSVAVNRTPPSAGMRVSLDQNAVKRCSGTCNAKLANNFPYRQSHVPVGAGVQRKLDAVNRDINSVDKLKKATQQQRKYRPPGKNSPTSVNSVRNVCEVSEASDKLSNMTIGTRKPSVGQPRRPPPMKAGGHWISESRSLLPSSGEIVSGRSYSRKIAG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00287 452 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Pte11g00287 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00287 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Pte11g00287 452 MobiDBLite consensus disorder prediction 400 430 - -
Pte11g00287 452 MobiDBLite consensus disorder prediction 362 385 - -
Pte11g00287 452 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Pte11g00287 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00287 452 MobiDBLite consensus disorder prediction 371 385 - -
Pte11g00287 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 348 - -
Pte11g00287 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pte11g00287 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00287 452 CDD STKc_MAK_like 4 283 - -
Pte11g00287 452 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Pte11g00287 452 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Pte11g00287 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00287 Pte-Chr11 3100814 3107022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00287 1 290 Core Cell Cycle Gene Families AT3G48750 38.255 3.80e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pte11g00287 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00287 K08829 - qsa:O6P43_033416 696.041