Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00282 ATGTCACAGCTACTTGGTCGGTTCTTTTACAGAAGACCCCCAGATGGGTTGCTTGAATTTGTCGACAGAGTATACGTTTTCGATTCATGCTTCTCAACTGAAGTGTTGCCCGAAGGAATGTACCAAATTTATCTATATGAAATCATAATGGAATTGTATGAGGAATTCCCAGACTCTTCATTCCTCGCTTTCAATTTCCGGGAAGGTGAGAAACGTAGCCAATTTGCTGAAATTCTGTGTCAGTATGATGTTACTGTATTGGATTATCCTAGACAATATGAAGGTTGCCCCCTGCTACCCTTATCTATTGTTCAGCACTTTCTTCGAGTTTGCGATTGCTGGCTTTCAGAGGGAAATCAACAAAATGTTATACTACTTCATTGTGAAAGAGGGGCTTGGCCTCTGTTGGCTTTCCTTTTAGCTAGCCTCTTAATTTTCAGAAGGTTGCGTAGTGGCGAGCGCAGAACACTTGAAATGGTGCACAAAGAAGCTCCAAAAAGATTTTTACAGCTCTTGTCACCTTTGAATCCATTGCCGTCTCAGCTTCGCTACCTTCAGTATGTAGCAAGAAGGAATATCTCTCTGGAATGGCCACCGCCTGAGCGTGCTCTTTCTTTAGATTGTCTCATTCTTCGAGCTATTCCTAGCTTTGATTCTCAGAAGGGGTGCAGGCCTATTATCCGAATATTTGGTAGGAATATTCACAGTAGAGGTGGGCTCTCAACTCAGATGCTTTACTCCATGCAGAAGAAGAAGACCTTGCGACATTACCACCAGGCAGACTGTGATGTGATCAAGATTGACATTCAGTGTCTTATACAAGGAGATGTAGTGTTGGAGTGTGTCCATTTAGATATCGAACCAGAAAGGGAAGTAATGATGTTCCGAATTATGTTCAATACAGCCTTCATTCGATCAAACATATTGATGCTGAATGCTGACAACTTGGACCTACTTTGGGATTCAAAGGATCGTTATCCGAAAGGTTTCAGGGCAGAGGTGTTGTTTGGGGAAGTTGAGAGTATATCTCCTCCAAAAGCTCCCACAAATATTTTGAATGGCGAGGAGAAAGGTGGATTGCCATTGGAAGCCTTTTCTAGGGTTCAAGAACTTTTTAGTGACGTAGAATTGGTTGGTGGTGGTGATGATGTAGCATTGTGGTTTCTTAGACAACTTTCTGTCCTAAGTGATGCAAAAGATTATTCTAGGATGCAAAACAAATCTAGCTTATACTTATCACCTGCTGATTCTGAAGATGAAAATAATGCCAGCTCAGCAGATAGTGCAGATGAAGCATTTGATGTTCCAAAATTTGTGGTTGATCCATCTACGGTGAAGCCTGAAGCTATAGATTCAGGTAATACTACAGTTGAAGGTGATGCCAGAGATTGTCTAACTCCTATTGCAACACCTAGTAAACAAGCATCAATTGAATGTTCTCCATCTGTATTTAAGGAAAAATCAGATCTTCATAGTGAAGATACTCCGACTAGTTTATCCTCTCTGTCTCCTCCAGCTCTTGCCCCTCAGCATCAACCTCCACCCCCGCGACCTCTGTTGTCTATCGACACTGCTGCACCATTAGCACTTCCTGGTCCCAGTAGAGATCCCCTGATACAATCAACTTCCACTTCCAATGGAGATCCTGCATCCTCTTTGGATACCTTACTTACTACAACAATATCTGCTAAAAGTAAAGGACATCCACCACTACCGCCGCCTCCTCCTCAACTTCATTTTTCTAGCAAAGCAGCACCACCATGTCCTCCTCCTCCACCACCCCCACTGCCTTTGAGTTCCTCTATCACTGGCAGCCACACTTCGTCAGTGCTACTACCATCACTCCCTCTGCCTCCTAGGTTGCCTCATGCAGGTTCTATACCCAGTGCTACATTCGTTCAAGTAGCAATACATCCTCCTCCTCCAGCTCTTTGTAGTCAGAGTACCAAGAGTGCTTCTAGAGCATTCACTCCTCCACCTCCACCTCCACCTCCACCTCCACCCCCTATAGGGAATTCTGCTGGTAGTGCTTCTAGACCATTTACACCTCCACCTCCTGCAGCTAACAGAACTGCTTCTAGACCTTTCCCATCCCCACCACCACCACCACCTCCTCCTCCCCCAAATCATACCACTAGCTTCACCTATGCACCCCCTCCACCTCCACCTGCTGTTGGACGTACTGGTCCTGCTAGGCCACCTCCTCCCCCTCCCCTGAATCATACTGCCAGCACCACCTCTGCACCACCTCCACCTCCATCTGCTGTTGGATGTACTGGTCCCCCTAGGCCACCTCCTCCTCCACCTACTATTGGATGCACTGGTCCTCCTAGGCCACCTCCTCCTCCACCTACTGTTGGATGCACTGGTCCCCCTAAGCCACCTCCTCCTCCACCTACTGTTGGATGTACTGGTCCCCCTAGGCCACCTCCTCCTCCACCTACTGTTGGATGTACTGGTCCTCCCAGGCCACCTCCTCCTCCACCTGCTGTTGGATGTACTGGTCCTCCTAGGCCACCTCCTCCCCCTCCATCAGGACCTGTAGGAACTGCTTCTGTTCCTCCACCTCCACCTCTAGTGGCTCCTCCTGTGTCAAAGGGTCTTGATGCAATGCCTCCAGCTGCTACATCTGTTGTTAGAGGTAGAACTTCTTCAGCTGCTAGTCTTGGAAGAGGGAGAGGTTCTCTTGGAATCACCAATTCCCCCAAGAAAAATTCGCTAAAGCCATTGCACTGGGTAAAAGTCACCAGAGCAATGCAAGGGAGTTTATGGGCTGATTCCCAGAAACAAGATAACCAATCAAGGCCCCCTGAGATAGATATATCAGAACTTGAGAGTCTATTTTCAGCAACCAATAACTCTGACGGACTTAGCAACAAGGGTGCAGGACGCCTTGGTTCCAGTATTAACAAACCTGAAAAAGTGCAGTTGGTGGATTTGCGCAGAGCATATAACTGCGAAATAATGCTTTCTAAAGTTAAAATTCCTTTGCCTGAGATGATTAATGCAGTTCTTGCTTTGGACTCTGCTGCTTTGGACATTGATCAGGTAGAGAATCTCATTAAGTTCTGCCCTACAAAGGAAGAAATGGAAAAACTAAAGAGTTATACAGGTGACCAGAAAATGCTTGGCAAATGTGAACAGTTTTTTATGGAGTTGATGAAGGTTCCACGGATAGAGTCAAAGTTACGGGTGTTTGCATTTAAGATCACCTTCTCTAGTCAGGTGAATGATTTGAAGTGCGATCTGAATACAATCAATGCTGCTGCAAGAGAGGTCAAAGAATCAATGAAGCTAAGACAGATAATGCAAACCATTCTTACTCTGGGAAATGCTTTGAATCAAGGAACTGCAAGAGGTTCAGCAGTAGGATTTAAATTAGACAGTCTCCTTAAACTGTCAGATACTCGTGCAAGAAACAATAAGATGACTCTAATGCATTATCTGTGTAAGGTTCTTTCAGATAAAATGCCAGAGTTAGTGGATTTCGACAAGGATCTTGTTCATTTAGAATCCGCCTCAAAGATTCAACTAAAATTATTGGCCGAAGAAATGCAAGCTGTTAGTAAAGGACTGGAAAAGGTGGAGCAGGAGCTTGCTGCTTCAGAAAATGATGGTGTTGTATCAGCAGGATTTCGAAAGGTGTTGAAAAATTTCCTTGATACTGCCGAGGCAGATGTGAGATCACTTATATCATTGTACTCAGAAGTGGGCCGGAATGCTGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGGTGTCCATTTGAGCAAGTGACGCAGATTTTGGTTGTGTTCATGAGGATGTTTAATAAGTCACGAGAAGAGAATTCGAGGCAGGCTGATGCTGAAAAGAAGAAATTGGAGAAAGAAGCTATGAAAGAACGAGCAGCAACACATACGACTTCAAGGAGAGATGGTTCGCATTAG 3933 0.4523 MSQLLGRFFYRRPPDGLLEFVDRVYVFDSCFSTEVLPEGMYQIYLYEIIMELYEEFPDSSFLAFNFREGEKRSQFAEILCQYDVTVLDYPRQYEGCPLLPLSIVQHFLRVCDCWLSEGNQQNVILLHCERGAWPLLAFLLASLLIFRRLRSGERRTLEMVHKEAPKRFLQLLSPLNPLPSQLRYLQYVARRNISLEWPPPERALSLDCLILRAIPSFDSQKGCRPIIRIFGRNIHSRGGLSTQMLYSMQKKKTLRHYHQADCDVIKIDIQCLIQGDVVLECVHLDIEPEREVMMFRIMFNTAFIRSNILMLNADNLDLLWDSKDRYPKGFRAEVLFGEVESISPPKAPTNILNGEEKGGLPLEAFSRVQELFSDVELVGGGDDVALWFLRQLSVLSDAKDYSRMQNKSSLYLSPADSEDENNASSADSADEAFDVPKFVVDPSTVKPEAIDSGNTTVEGDARDCLTPIATPSKQASIECSPSVFKEKSDLHSEDTPTSLSSLSPPALAPQHQPPPPRPLLSIDTAAPLALPGPSRDPLIQSTSTSNGDPASSLDTLLTTTISAKSKGHPPLPPPPPQLHFSSKAAPPCPPPPPPPLPLSSSITGSHTSSVLLPSLPLPPRLPHAGSIPSATFVQVAIHPPPPALCSQSTKSASRAFTPPPPPPPPPPPPIGNSAGSASRPFTPPPPAANRTASRPFPSPPPPPPPPPPNHTTSFTYAPPPPPPAVGRTGPARPPPPPPLNHTASTTSAPPPPPSAVGCTGPPRPPPPPPTIGCTGPPRPPPPPPTVGCTGPPKPPPPPPTVGCTGPPRPPPPPPTVGCTGPPRPPPPPPAVGCTGPPRPPPPPPSGPVGTASVPPPPPLVAPPVSKGLDAMPPAATSVVRGRTSSAASLGRGRGSLGITNSPKKNSLKPLHWVKVTRAMQGSLWADSQKQDNQSRPPEIDISELESLFSATNNSDGLSNKGAGRLGSSINKPEKVQLVDLRRAYNCEIMLSKVKIPLPEMINAVLALDSAALDIDQVENLIKFCPTKEEMEKLKSYTGDQKMLGKCEQFFMELMKVPRIESKLRVFAFKITFSSQVNDLKCDLNTINAAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKVLSDKMPELVDFDKDLVHLESASKIQLKLLAEEMQAVSKGLEKVEQELAASENDGVVSAGFRKVLKNFLDTAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFMRMFNKSREENSRQADAEKKKLEKEAMKERAATHTTSRRDGSH* 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00282 1310 FunFam Formin-like protein 897 1283 - -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 475 607 - -
Pte11g00282 1310 Coils Coil 1178 1205 - -
Pte11g00282 1310 SMART it6_source 509 1307 IPR015425 -
Pte11g00282 1310 Pfam Formin Homology 2 Domain 901 1272 IPR015425 -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 655 863 - -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 507 521 - -
Pte11g00282 1310 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 188 IPR029021 -
Pte11g00282 1310 ProSiteProfiles C2 tensin-type domain profile. 201 339 IPR014020 -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 536 565 - -
Pte11g00282 1310 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Pte11g00282 1310 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 339 IPR035892 -
Pte11g00282 1310 SMART PTEN_C2_2 199 338 IPR014020 -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 567 599 - -
Pte11g00282 1310 Coils Coil 1272 1299 - -
Pte11g00282 1310 Gene3D Protein tyrosine phosphatase superfamily 17 193 IPR029021 -
Pte11g00282 1310 SUPERFAMILY Formin homology 2 domain (FH2 domain) 839 1291 - -
Pte11g00282 1310 ProSiteProfiles Formin homology-2 (FH2) domain profile. 897 1297 IPR015425 -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 444 463 - -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 1274 1310 - -
Pte11g00282 1310 Gene3D - 198 342 - -
Pte11g00282 1310 PANTHER FORMIN-J 791 1300 - -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 878 906 - -
Pte11g00282 1310 MobiDBLite consensus disorder prediction 638 906 - -
Pte11g00282 1310 Gene3D Formin, FH2 domain 899 1283 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00282 Pte-Chr11 3048269 3056392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00282 4 434 FH2 protein (formin) Gene Family AT1G31810 74.827 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00282 - - qsu:111989230 743.036