Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00270 ATGAACAACATCAACAGCTGTAACCCAGGACAAGATCTTGATCAACCAGCCTCTGATTATCTGACTCAACAGACCCATCATCACCCCCAACTCCACAATCTCCAAACCCATTCTCAACCTCAGCCTCAGCCACGTCGTCCTCGTGGCTTCGCGGCAACGGCGGCAATGGGAGCCACCACTGCTACAGCAGCCTCCAACAATTGTAACAGTGCTATTACTAGTGGTGGTAAGGGGAAGAAGGAAAGGGAGAAAGAGAAGGAGCGGACCAAGCTGAGGGAACGTCATCGTCGAGCCATCACTAGCCGTATGCTTGCTGGGCTTCGTCAGTATGGCAATTTTCCTCTGCCTGCACGCGCTGACATGAATGATGTGCTTGGAGCGCTTGCTCGTGAGGCCGGTTGGGTTGTGGAGGCTGATGGAACTACTTACAGGCAGTCCCCACCTCCTTCTCAGATGGCAACATATGGAGTGAAGTCAGTGGAAAGCCCACTTTCTGCTGGTTCTCTAAGAAATTGCTATGTGAAAGCAACTTTAGATTGTCAGCCCTCTGTTCTTAGAATCGATGAAAGCTTGTCACCGGCATCCCTTGATTCTGTTGTAATTGCTGAAAGGGACACCAAAAGTGAAAAATGTACTACTGGAAGCCCGGTCACTTCAGTTGAATGCTTGGTGCCTGATCAGCTTATGCAGGGTATTCAGTCCGCTGATCATGGGAGCTATTTCACAAGCACACCTTATGTTCCTGTTTACATCAAGCTTGGACCTGCTATCATCAACAAGTATTGCCAGTTGATGGATCCTGATAGCGTCAGGCTGGATATAAGTAACATGAAGTCTTTAAATGTAGATGGCATTGTGGTGGATTGTTGGTGGGGTATTATTGAAGCATGGAGCCCGCAGAAATATGTGTGGTCTGGCTATAGAGAACTTTTTCATATAATAAGAGAATTTAAACTGAAGTTGCAGGTTGTGATGGCATTTCATGAATTTAAAGAAAATGATTCTAGTGAGACATTGATCACTCTTCCTCAATGGGTTTTGGAGATTGGCCAAGGCAATCCAGACATATTTTTTACAGATCGTGAAGGGCAGAGAAATACTGAATGCCTTTCCTGGGGTATCGACAAAGAAAGGGTTCTAAAAGGGAGAACTGGTATTGAGATCTATTTTGATTTCATGCGAAGCTTTCGGACTGAGTTTGATGACCTGTTTGCTGAGGGTCTAATATCTGGTGTCGAAATTGGTCTTGGTGCATCTGGGGAGCTAAAATACCCTTCTTTTTCAGAAAGGATGGGTTGGAGGCACCCTGGTATCGGTGAGTTTCAGTGCTACGATAAATATATGCAACAAAGCCTTCGCAGAGCAGCTAAATTGCGTGGTCACTCATTTTGGGCTAGAGGACCTGATAATGCTGGTCATTACAATTCTATGCCACATGAAACTGGGTTCTTTTGTGAGCGTGGTGATTATGACAGCTATTATGGGCGTTTTTTTCTCAATTGGTATTCTCAGGCATTGATAGATCATGCCGATAATGTTTTGTCTCTTGCAACCCTCTCCTTTGAGGAAACAAACATAATTGTTAAGGTTCCTGCTGTTTACTTGTGGTACAAGACTTCTAGTCATGCTGCAGAGCTGACAGCTGGATTCTACAATTCAAGAAACCAGGATGGATATGCCCCATTGTTTGAAGTACTGAAGAAGCACTCCGTTACAATGAAATTCATGTGCTTAGGATTGCCAATTTCAGATCAGGGCAATAATGAATCTATGTCAGATTCAGAGGGCTTGACTTGGCAGGTTTTGAACTCAGCATGGGATCGAAACTTGGGAGTGGCTGGCGAGAATGCACTTTCTTGTTTCGATTGCGAAGGGTACAAGAGGTTAATTGAGATAGCGAAACCAAGAAATGCCCCCGATCACCGCCATTTCACATTCTTTGTACACCAACTATCCTTAGCTCAAGGAAATATTTGCTTTACAGAGTTGGATTCCTTCCTCAAGTGCATGCATGGTGAGGTAGCAGGTATGGGACCTCAATGA 2043 0.4493 MNNINSCNPGQDLDQPASDYLTQQTHHHPQLHNLQTHSQPQPQPRRPRGFAATAAMGATTATAASNNCNSAITSGGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLGALAREAGWVVEADGTTYRQSPPPSQMATYGVKSVESPLSAGSLRNCYVKATLDCQPSVLRIDESLSPASLDSVVIAERDTKSEKCTTGSPVTSVECLVPDQLMQGIQSADHGSYFTSTPYVPVYIKLGPAIINKYCQLMDPDSVRLDISNMKSLNVDGIVVDCWWGIIEAWSPQKYVWSGYRELFHIIREFKLKLQVVMAFHEFKENDSSETLITLPQWVLEIGQGNPDIFFTDREGQRNTECLSWGIDKERVLKGRTGIEIYFDFMRSFRTEFDDLFAEGLISGVEIGLGASGELKYPSFSERMGWRHPGIGEFQCYDKYMQQSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDSYYGRFFLNWYSQALIDHADNVLSLATLSFEETNIIVKVPAVYLWYKTSSHAAELTAGFYNSRNQDGYAPLFEVLKKHSVTMKFMCLGLPISDQGNNESMSDSEGLTWQVLNSAWDRNLGVAGENALSCFDCEGYKRLIEIAKPRNAPDHRHFTFFVHQLSLAQGNICFTELDSFLKCMHGEVAGMGPQ* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00270 680 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 181 672 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 MobiDBLite consensus disorder prediction 76 93 - -
Pte11g00270 680 MobiDBLite consensus disorder prediction 22 49 - -
Pte11g00270 680 Pfam BES1/BZR1 plant transcription factor, N-terminal 76 221 IPR008540 -
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 324 345 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 281 295 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 524 540 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 302 320 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 559 582 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 490 509 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 541 552 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 597 619 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 417 439 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 Pfam Glycosyl hydrolase family 14 266 653 IPR001554 GO:0000272|GO:0016161
Pte11g00270 680 MobiDBLite consensus disorder prediction 22 43 - -
Pte11g00270 680 Gene3D Glycosidases 239 677 - -
Pte11g00270 680 MobiDBLite consensus disorder prediction 65 93 - -
Pte11g00270 680 SUPERFAMILY (Trans)glycosidases 241 672 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00270 Pte-Chr11 2902917 2909112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00270 29 674 Glycoside Hydrolase AT5G45300 63.404 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pte11g00270 Glyco_hydro_14 5.4e-79 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00270 K01177 - qsa:O6P43_025030 1009.21