Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00262 ATGCGTGCCTTTCTTTTTTTCATGCTTCTATGCCTCCCATTCCTATCCTGCGCCCAACGGAGTGCAGAAACCGTGGCTGAGATCCAAGCTTTGACTTCCTTCAAACTCGATCTCCATGATCCATTTGGAGCTCTAACCAATTGGGACTCTCTCACGCCGGCTGCTCCTTGTGACTGGAGAGGAGTCACCTGCGACGCAAATAACCGAGTCACTGACCTCCGCTTGCCCCGTCTTCAACTCGGTGGCCGGCTCACTAACAGACTCGGAGACCTCAGGTTCTTGAGAAAGCTCAGCCTTCGTTCCAACTTCTTCAACGGTACTCTACCACCTTCACTCGCCAAATGCACGCTCCTACGCGCAGTCTTTCTCCAATACAACTCGTTCTCGGGAAATCTCCCCCCTGCCTTCGGGAACCTCACCGGACTTCTAGTCCTCAACGTCGCACAGAACAACCTCTCTGGCGAAATTTCAGCTGGGCTTCCTTCTAGTCTTAGGTACCTTGACCTTTCTGTAAATGAGTTCTCTGGCGAGATTCCCAGCACCCTTGCCAATCTTACGCAACTTCAACTCATAAATCTCTCCTACAACCAGTTCACCGGTGAGATACCAGCGAGCTTTGGACAACTCCAGCAGCTTGAATATCTGTGGCTCGATCACAATCTGCTCCGGGGAACGCTTCCTTCCGCGCTTTCTAATTGCTCTTCCTTAGTTCATCTGAGCGTCGAAGGCAATGCACTCTCTGGTGTGATTCCAGCCGCCATCGGAGCACTTCCTAAGCTTCAGGTGTTGTCTCTGTCGCAGAACAATCTCACGGGTTCCGTTCCTGCTTCCATGTTTTGCAACGTTTCTGTCTATACGCCGTCACTACGGATCGTTCAGCTAGGCATGAATTTGCTCACGGATTTGGTGGGTCTCCAGACAAAGACGTGCTTCAGTGTTCTTCAGGTACTGGATCTTCAGCACAATCGCATTAATGGGACGTTTCCTTTATGGTTAACTTTTGTGTCCTCCCTTAAAGTGCTTGATGTCTCGAGTAATGCATTTTCTGGTACTATTCCAATTCAATTTGGAAACCTCACGAGGCTAGAGGAATTAAGGATGAGTAATAATTCATTCACGGGAACCATACCTGTTGAAATAACAAAGTGTACTTCTCTGAGTGTTGTAGATTTTGAACGGAACCAATTTTCTGGTCCAGTTCCTCCATTTTTTAGTGATATGAAGGGCCTGAAGGCATTGTCTCTTGGAGGAAATTTGTTTTCTGGTCCAGTTCCTCATAGTTTTGGTAATCTCTGGCAGCTTGAAAGCTTAAGTTTGAGAGGTAATAAATTGAATGGAACTATTCCTGAGGAGTTAATGAGATTGAGTAATTTAAGTTCATTGGACCTAAGTGGAAACAAGTTTTCAGGTCAAATGCCTGTCAGTATTGGAAATCTAAGTCGGCTGATGTTTCTTAATCTGAGCGGCAATAGCTTTTCTGGGCAGATACCGGCCAGCGTTGGAAATCTTTTTAGGTTAACCACTCTTGACTTGAGTAAGCAAAATCTCTCTGGCCAATTGCCATTTGAGCTTTATGGATTGCCAAATCTGCAAGTCATTGCTCTCCAGGAGAACAAACTATCTGGAGATGTGCCTGAAGGGTTCAGTAGTTTGTTGAGTTTGCTGTATTTGAATCTCAGTTCTAATTCCTTCTCTGGTCATATTCCTGAAAACTATGGGTTTCTAAGATCGTTGTCTGTTCTTTCATTGTCGAAAAATCACATTTCTGGGATGATTCCACCAGATATTGGAAACTGCTCAAGTATTGAATTTCTTCAACTCGGTTTCAACTCTTTGATCGGTAATATCCCAAATGATCTCTCTCGTTTGTCCCATTTGAAAGAGCTTGATTTGGGTAGGAACAATTTAACAGGGGATATCCCTGAGGATATCTCTAGATGTTCTTCGTTAAGTGTCTTGTTATTGAATGGCAATCATCTCTCTGGCAGCATACCAGAGTCTCTTTCAGAGTTATCAGACTTGACAATTTTGGATCTCTCTGCTAACAATTTGACTGGTGAAATTCCTGGAAATATTTCATTGCTTTCTTCTCTGGAATATTTCAATGTCTCAGCGAACAACCTTGAAGGTGAGATACCTCCTGCTCTGGGTTCTCGGTTTAACAACCCATCGGCATTTGGGCACAACTCTGACTTGTGTGGGAAGCCATTGGATAGGAAGTGCAAAGATGTTGTTGCTAGGGATAGAAAAAGGTTGATTCTTTTGATGGTTCTTGTTGCAATTGGAGCTTTGTTATTGGCATCATGTTGCTGCTTCTACATCTTCACCCTTTTAAGGTGGCGAAGAAAGATTAAACTAAGGGCATCTGGAGAGAAGAAAAAGAGTCCTGGAAGAGACAGTTCGGGAGCTAGTGCTGGCCGCAGCAGCACCGATAATGGTGGACCAAAGCTTGTCATGTTTAACAATAAGATAACACTGGCTGAAACTATTGAAGCAACAAGGCAGTTTGATGAAGAAAATGTGTTAGGCAGAACAAGGCACGGGTTAGTTTTCAAGGCCTGCTACAACGATGGAATGGTTCTTTCTATTCGCAGGCTTCCAGATGGGTCATTGGATGAAAATATGTTCAGAAAAGAAGCTGAATCACTAGGAAAAGTGAAACACCGTAACCTAACTGTTCTAAGAGGCTACTATGCTGGGCCACCGGACTTGAGGCTTCTTGTGTATGACTACATGCCTAATGGAAATCTTGCTACCCTTCTGCAAGAAGCTTCCCACCAAGATGGCCATGTACTGAATTGGCCTATGCGTCACCTCATTGCTCTTGGAATTGCGCGTGGCTTGGCATTTTTACATCAATCCACAATGGTTCATGGTGATGTAAAGCCACAGAATGTTCTGTTTGATGCAGATTTTGAAGCACATTTGTCTGATTTTGGTCTGAATCGCTTCATAGTAGCCACTCAATCTGAAGCTACTACTTCAAGTGTTATTGGTACGTTAGGGTATGTATCTCCAGAAGCAGTTTTGACAGGGGAAGTGACCAAGGAATCTGATGTCTACAGCTTTGGTATAGTGTTACTTGAGCTTCTAACAGGTAAGCGACCTGTGATGTTCACTCAGGATGAAGATATCGTTAAGTGGGTTAAGAGACAATTACAAAGAGGTCAAATTACTGAATTGTTGGAGCCAGGGTTGCTTGAGCTTGACCCTGAATCATCCGAGTGGGAAGAATTCCTGCTTGGAGTGAAGGTTGGCTTGCTCTGCACAGCACCGGACCCCCTTGACCGTCCAACCATGTCTGACATAGTCTTCATGCTAGAAGGTTGCCGAGTTGGACCTGACATCGCCTCCTCGGCAGATCCCACATCTCATCATTCACCGGCATAG 3390 0.4484 MRAFLFFMLLCLPFLSCAQRSAETVAEIQALTSFKLDLHDPFGALTNWDSLTPAAPCDWRGVTCDANNRVTDLRLPRLQLGGRLTNRLGDLRFLRKLSLRSNFFNGTLPPSLAKCTLLRAVFLQYNSFSGNLPPAFGNLTGLLVLNVAQNNLSGEISAGLPSSLRYLDLSVNEFSGEIPSTLANLTQLQLINLSYNQFTGEIPASFGQLQQLEYLWLDHNLLRGTLPSALSNCSSLVHLSVEGNALSGVIPAAIGALPKLQVLSLSQNNLTGSVPASMFCNVSVYTPSLRIVQLGMNLLTDLVGLQTKTCFSVLQVLDLQHNRINGTFPLWLTFVSSLKVLDVSSNAFSGTIPIQFGNLTRLEELRMSNNSFTGTIPVEITKCTSLSVVDFERNQFSGPVPPFFSDMKGLKALSLGGNLFSGPVPHSFGNLWQLESLSLRGNKLNGTIPEELMRLSNLSSLDLSGNKFSGQMPVSIGNLSRLMFLNLSGNSFSGQIPASVGNLFRLTTLDLSKQNLSGQLPFELYGLPNLQVIALQENKLSGDVPEGFSSLLSLLYLNLSSNSFSGHIPENYGFLRSLSVLSLSKNHISGMIPPDIGNCSSIEFLQLGFNSLIGNIPNDLSRLSHLKELDLGRNNLTGDIPEDISRCSSLSVLLLNGNHLSGSIPESLSELSDLTILDLSANNLTGEIPGNISLLSSLEYFNVSANNLEGEIPPALGSRFNNPSAFGHNSDLCGKPLDRKCKDVVARDRKRLILLMVLVAIGALLLASCCCFYIFTLLRWRRKIKLRASGEKKKSPGRDSSGASAGRSSTDNGGPKLVMFNNKITLAETIEATRQFDEENVLGRTRHGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDLRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSTMVHGDVKPQNVLFDADFEAHLSDFGLNRFIVATQSEATTSSVIGTLGYVSPEAVLTGEVTKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKRQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIASSADPTSHHSPA* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00262 1129 Gene3D Transferase(Phosphotransferase) domain 1 912 1118 - -
Pte11g00262 1129 SMART LRR_typ_2 695 719 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 527 550 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 209 233 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 623 647 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 455 478 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 139 163 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 185 208 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 335 358 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 257 281 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 479 503 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 359 383 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 671 694 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 91 115 IPR003591 -
Pte11g00262 1129 SMART LRR_typ_2 575 599 IPR003591 -
Pte11g00262 1129 Gene3D Ribonuclease Inhibitor 454 744 IPR032675 -
Pte11g00262 1129 Gene3D Ribonuclease Inhibitor 251 352 IPR032675 -
Pte11g00262 1129 Gene3D Ribonuclease Inhibitor 353 452 IPR032675 -
Pte11g00262 1129 MobiDBLite consensus disorder prediction 801 816 - -
Pte11g00262 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 184 - -
Pte11g00262 1129 MobiDBLite consensus disorder prediction 789 816 - -
Pte11g00262 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Pte11g00262 1129 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 465 745 - -
Pte11g00262 1129 Gene3D Ribonuclease Inhibitor 24 160 IPR032675 -
Pte11g00262 1129 Gene3D Phosphorylase Kinase; domain 1 805 911 - -
Pte11g00262 1129 SUPERFAMILY L domain-like 287 568 - -
Pte11g00262 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
Pte11g00262 1129 FunFam Piriformospora indica-insensitive protein 2 355 450 - -
Pte11g00262 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 203 303 - -
Pte11g00262 1129 Pfam Leucine rich repeat 605 660 IPR001611 GO:0005515
Pte11g00262 1129 Pfam Leucine rich repeat 314 371 IPR001611 GO:0005515
Pte11g00262 1129 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Pte11g00262 1129 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Pte11g00262 1129 Pfam Leucine rich repeat 386 444 IPR001611 GO:0005515
Pte11g00262 1129 Pfam Protein kinase domain 837 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00262 1129 SUPERFAMILY Protein kinase-like (PK-like) 816 1114 IPR011009 -
Pte11g00262 1129 SMART LRR_sd22_2 671 703 - -
Pte11g00262 1129 SMART LRR_sd22_2 311 326 - -
Pte11g00262 1129 SMART LRR_sd22_2 623 646 - -
Pte11g00262 1129 SMART LRR_sd22_2 209 235 - -
Pte11g00262 1129 SMART LRR_sd22_2 431 454 - -
Pte11g00262 1129 SMART LRR_sd22_2 455 481 - -
Pte11g00262 1129 SMART LRR_sd22_2 257 284 - -
Pte11g00262 1129 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pte11g00262 1129 ProSiteProfiles Leucine-rich repeat profile. 673 695 IPR001611 GO:0005515
Pte11g00262 1129 Gene3D Ribonuclease Inhibitor 161 250 IPR032675 -
Pte11g00262 1129 SUPERFAMILY L domain-like 25 302 - -
Pte11g00262 1129 SUPERFAMILY L domain-like 485 718 - -
Pte11g00262 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 356 1109 - -
Pte11g00262 1129 SMART serkin_6 836 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00262 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1115 - -
Pte11g00262 1129 ProSiteProfiles Protein kinase domain profile. 836 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00262 Pte-Chr11 2808564 2812346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00262 4 1130 Receptor kinase-like Gene Family AT4G36180 70.676 0.0 1507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pte11g00262 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00262 - - qsa:O6P43_024844 1750.72