Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00260 ATGACGGAACCATGTGTCCCACCTGGGTTTCGGTTCCACCCAACGGATGAAGAACTCGTTGGCTATTATCTGAGGAAGAAAGTCGGTTCTCAGAAGATTGATCTTGATGTTATAAGAGATATCGATCTATATCGTATTGAACCATGGGATCTCATAGAGAGATGCCGGATTGGTTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAGGATAAGAAGTACCCAACTGGGACAAGGACTAATAGAGCAACCATGGCTGGGTTCTGGAAGGCAACTGGAAGAGACAAGGCAGTGTACGATAAAGCAAAACTGATTGGGATGAGGAAAACCCTCGTTTTCTACAAAGGGAGAGCTCCAAATGGACAGAAAAGTGACTGGATCATGCACGAGTACAGACTCGAATCCGATGAGAATGGACCTTCACAGGAAGAAGGATGGGTTGTCTGCAGAGCATTCAAGAAAAGAACAACGGGACAAACAAGGGTCGTTGAAGGTTGGGATTCAAGCTACTTCTACGATGAAGCAAGTGGGGTTAGCTCAGTGGTCGATCCACTTGATTTCATATCAAGGCAGCCTCAGAATCTTGTAGCTCAAAGTTTCATGTGTAAGCAAGAGATAGAATCAGATAACTTGAGTTTCATGCATTCAGATCATTTTGTACATCTGCCTCATCTAGAAAGTCCGTCTTTGACATTAATAAAGAGGCCAGGCTCAATGTCTGTGATACCCGAGAATAACGAAGATGAAGATCGAAATAGAGCAACAAATATGGCAAGCAAAAAAGTAACTGATTGGAGGGATCTTGACAAGTTTGTTGCTTCACAGTTGAGTCCTGAAGACAGAAATGAGGGAAATGGGATGCCGAACATTGAGACGCACGACTGTTCAGACATGGCATTATTACTATTACAGAGTAGCAGGGATGAAGGGAACAAGCTAAGCTCATTATTAAGTTCTAGCTCAGACGGTGATATTGGAATATGCGTATTTGACAAATGA 1002 0.4301 MTEPCVPPGFRFHPTDEELVGYYLRKKVGSQKIDLDVIRDIDLYRIEPWDLIERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPSQEEGWVVCRAFKKRTTGQTRVVEGWDSSYFYDEASGVSSVVDPLDFISRQPQNLVAQSFMCKQEIESDNLSFMHSDHFVHLPHLESPSLTLIKRPGSMSVIPENNEDEDRNRATNMASKKVTDWRDLDKFVASQLSPEDRNEGNGMPNIETHDCSDMALLLLQSSRDEGNKLSSLLSSSSDGDIGICVFDK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00260 333 FunFam NAC domain-containing protein 15 159 - -
Pte11g00260 333 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Pte11g00260 333 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Pte11g00260 333 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Pte11g00260 333 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Pte11g00260 333 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00260 Pte-Chr11 2793517 2797749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00260 3 334 NAC Transcription Factor Family AT2G18060 62.842 4.94e-158 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte11g00260 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00260 - - aprc:113869508 556.984