Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00257 ATGAAGCGGTCAAGCAAATCCAAAAGGGTTTCATGGGCTCCAAGATTCGATCTTTGTCAGGTGAAGTTGTTTTCATCTGAAGATTGCCCGTCAGAGGTTGGTTACAAACTTCAAGCTGATCTTCAAGCAAAGACGATGTGGATGTTGCAGTTCAGCAAAAGCACCACTGATTCCAGCGATGTTCCTCCTGGATTTGAAGGAAAGAAGTTTCAGAACAAATTGAAGGAAGAGGTTCCAAAGATCCCCCAGATTAGATGGAAATGCCCTCCAAAATTTATACCACGAAGCAATTGGTTTGTGGCAGCTAGTGAAGAAAGTGAAGAAAAAGATTCTGAAAAAATTAGGGAAATGAGAGTTCTTGAAGCTGTTTATCCCAGACACGCCTCCATTCCTTCGAGCCCTCGTGTTTCTATGGATGTTGAAAACGCACAATATGATGACAGTGTTACTCCGATAATCCCTATGATTCCGATTGAGGAAGAAGATTATATGGATGTGAAGTCGGATGTGGAAGGGAAAGTTAAGTACCCTGTTACAACTGAACCAGAATTCCTTCCCCCTCAAACATCAGCAACTGCTACTCCCGTCAGTGCAAAAACTGGCATTCCTCCCGCTTCGTCTGGTGTCTGCAAAGGAAAATCTGGAATTTCACCTAATCAAATCTCAGATCGTGTTGCCTCTGCATCTGCCGCATTAGCTGCAATCATGAAGTTTAGCAAGGAGGGAAGTATAATTGACTCAGATATGCTCTTGAAAATCCTGACTGATCCAAAAATGAGTGAGAGGCTGATTAATGAGCATGCAAGAATAGGAACTGCAAAAAATACTGCCACTTCTATGTGCTATCAACCCACTATCATCTTCAATCCTGCAAACCCATCCGTTATATTGTCTAGAGGTACTAATGAGATAAACAAGGCTATCACAAGAGACATGGTCGGTATGCCCTCTTCAATTCCCACGTCTAGGATTGCAACTCCAGAAATTCCCATATCGAAACCTACAGTTGATATGAACAAAGCCGTAAACCAAGATGCAGTAGGTGTTGCAACTTTTGATGCTAACAGGCTTATGAATCAAAATACGATTAGGTTATCCACATTAAGTTCTGAGCCAGCAAGCCCGGCAGTTCGGTCGTCACTTGCCAGGCCTGATTCATACGGACATATGAAACAAGACATGCACCATAATCCTGAGGTGGTTAATGTGAAAAGGGTACCCTCCTCCTCCCGCAATGGAATACCTGGGACAAAAAGAGTAGCCTCGACAGCTTTCCCCAATGCTTGTCCTGAACCGAACTCGATAGTGAAGTCAGCTGGAAATATGCATTCAGTAGCGAATCAGTTCGGACCTGTTACGAGTTCAATGCCTAACCTTTCAAAGACAGCTTTCATTTCCTCTGCTTTGACGGACAGTAGTTCTCAGAAGGACATGAACTATTACAAGAACCTAATTAAGGAACATGGTATGGAAAAGCATGAAATAATGAATCAACAGATAGGCAAACGTCAAAGTGACATACGAGATGTGAAACTGGTAAATAGGCCTAAATATCAGAAACCTTGCATTTACTTTACCAGCTCGAAGGGATGTCGTAATGGATCGACCTGCCCGTACACGCATGACACGAATGTTCACTTGAAGACAACAACAGTTATTGGGGTTCACGTTGGGAAGAGATTGAGACTATAA 1692 0.4285 MKRSSKSKRVSWAPRFDLCQVKLFSSEDCPSEVGYKLQADLQAKTMWMLQFSKSTTDSSDVPPGFEGKKFQNKLKEEVPKIPQIRWKCPPKFIPRSNWFVAASEESEEKDSEKIREMRVLEAVYPRHASIPSSPRVSMDVENAQYDDSVTPIIPMIPIEEEDYMDVKSDVEGKVKYPVTTEPEFLPPQTSATATPVSAKTGIPPASSGVCKGKSGISPNQISDRVASASAALAAIMKFSKEGSIIDSDMLLKILTDPKMSERLINEHARIGTAKNTATSMCYQPTIIFNPANPSVILSRGTNEINKAITRDMVGMPSSIPTSRIATPEIPISKPTVDMNKAVNQDAVGVATFDANRLMNQNTIRLSTLSSEPASPAVRSSLARPDSYGHMKQDMHHNPEVVNVKRVPSSSRNGIPGTKRVASTAFPNACPEPNSIVKSAGNMHSVANQFGPVTSSMPNLSKTAFISSALTDSSSQKDMNYYKNLIKEHGMEKHEIMNQQIGKRQSDIRDVKLVNRPKYQKPCIYFTSSKGCRNGSTCPYTHDTNVHLKTTTVIGVHVGKRLRL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00257 563 ProSiteProfiles Zinc finger C3H1-type profile. 516 544 IPR000571 GO:0046872
Pte11g00257 563 MobiDBLite consensus disorder prediction 181 201 - -
Pte11g00257 563 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 544 - -
Pte11g00257 563 MobiDBLite consensus disorder prediction 406 425 - -
Pte11g00257 563 MobiDBLite consensus disorder prediction 183 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00257 Pte-Chr11 2769506 2774685 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte11g00257 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00257 - - qsa:O6P43_024850 385.571