Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00254 ATGGGCATCAGGTCAAAATCCAATAAGCTGCCACAATCAGCAGCTTTCAAGCAAATTCTAAGAAGGTGCTCCTCGAATTTTGGTAGGAAAAATGGCGATGAAGATAATCGGCTTCCGGATGATATTCCGAAAGGCCATTTTGCTGTCTACGTTGGCCAAAACAGAAGCAGATACATTATACCCATTTCCTGGTTGTCTCGTCCAGAGTTTCAGAGTCTGCTCCAAAGAGCTGAGGAGGAATACGGCTTTGATCATGACATGGGCTTGACTATCCCTTGTGACGAATATGTTTTCCAGTCCCTAGCTTCTCTGATCAAAACATGA 324 0.4414 MGIRSKSNKLPQSAAFKQILRRCSSNFGRKNGDEDNRLPDDIPKGHFAVYVGQNRSRYIIPISWLSRPEFQSLLQRAEEEYGFDHDMGLTIPCDEYVFQSLASLIKT* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00254 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 39 103 IPR003676 GO:0009733
Pte11g00254 107 Pfam Auxin responsive protein 25 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00254 Pte-Chr11 2754617 2755700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00254 8 101 Calmodulin-binding Proteins AT5G20810 42.857 2.41e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00254 K14488 - rcu:107262166 164.851