Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00251 ATGGAACACCAACCACAATATCAACAGAACCAACAGCAATCAACAAACGAGGATGGCATTTGTGGCAGTGCAAAAGGTGGATATTTGTGCAGGCAGAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATACTGAAGGACCTTTATTACAACAGTGGTGTTAGGTCACCGAGTGCAGAGCAGATTCAGAGGATTTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTATTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATGTTCCCATGCATAAGGGAGGAAATGTTTCTTGGAAACCTGATGAGTCCATTCACAAGTATTCTCACACATCTGCAGGGGTCTCATCTGCACCTTCCTCTTCAGCTGGAATGGGCAATGTGGGACAGATAGGAGCATACGGATGTGGATCAGCGACAATGGAAAAGAGCTTTAGGGACTGCTCTATATCTGCTGCAGATAGCAATGGAAACATTGGTGGTGCCTTGGGTCACGGTTGGGGTTTAGTTGGTGCGGATCCATATTCCCATGCAACCTACACACTCATTGACAAAAGAAGATCAACTTATGAGCACACAATGGAAGATGATCAAGAAGATGAAGCTGGCCCGGAGATTGCAACCCTCCCTCTTTTCCCTATGCATGGTGAGGATTTTCACGGCTATTGCCAACTCCAGCCCGACTCTGTCTATTCTGCCTACTACGGTGGCTGGTATCGCAGTACTGAGGATGGAAACCACAACATTTCTCGCACTTCCCTCGAACTTAGCCTCAACTCCTACGGGCGCAGATCACCTGATTCTGCTTGA 852 0.473 MEHQPQYQQNQQQSTNEDGICGSAKGGYLCRQSSTRWTPTTDQIRILKDLYYNSGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVPMHKGGNVSWKPDESIHKYSHTSAGVSSAPSSSAGMGNVGQIGAYGCGSATMEKSFRDCSISAADSNGNIGGALGHGWGLVGADPYSHATYTLIDKRRSTYEHTMEDDQEDEAGPEIATLPLFPMHGEDFHGYCQLQPDSVYSAYYGGWYRSTEDGNHNISRTSLELSLNSYGRRSPDSA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00251 283 SMART HOX_1 32 100 IPR001356 GO:0003677
Pte11g00251 283 Pfam Homeodomain 34 95 IPR001356 GO:0003677
Pte11g00251 283 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 13 277 IPR044555 GO:0003700|GO:0099402
Pte11g00251 283 ProSiteProfiles 'Homeobox' domain profile. 30 96 IPR001356 GO:0003677
Pte11g00251 283 FunFam WUSCHEL-related homeobox 11 34 101 - -
Pte11g00251 283 CDD homeodomain 35 97 IPR001356 GO:0003677
Pte11g00251 283 Gene3D - 30 95 - -
Pte11g00251 283 SUPERFAMILY Homeodomain-like 27 102 IPR009057 -
Pte11g00251 283 MobiDBLite consensus disorder prediction 96 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00251 Pte-Chr11 2730280 2731658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00251 28 232 Wox Gene Family AT2G17950 40.873 3.42e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte11g00251 Homeodomain 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00251 - - qsa:O6P43_024861 337.035