Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00249 ATGGGTATCTGCCTGTCCTCCATTAAAGTCAGTGGCTCAAATAGCAACAACACAAAAACCAGCACAGGCGTTGAGAAACGCAAAAAACAAAGGAAGGCACAATCATCTTCATCAAAGAACAAACCATTCATTCAAGGACGTAGGACGATCAATGTCGCCCACAAGACTCAGCAGCAGACGCAATCAAAGAGTACCCCTCAAACTCGGAATAAGGACAGGCTTACTTCGAGGCGAAAATATGGGGCGATCGCATGCGGCAAGCGTACGGATTTTGGGTACGATAAAGATTTTCATAAACGTTACACGCTTGGAAAATTGTTGGGGCATGGACAATTTGGATTCACGTATGTTGCAACCGATAAAACAAATGGCGATCGAGTAGCAGTTAAGAGAATTGATAAAAACAAGATGCTTCTTCCAATTGCTGTTGAGGATGTGAAGCGAGAGGTCAAGATATTGCGAGAACTTACAGGGCACGAGAACGTAGTTCAGTTCTACAATGCATATGAGGATAATTCATATGTTTATATAGTGATGGAGTTATGTGAAGGCGGGGAGCTGCTAGATCGAATATTGGCTAAGAAGGATAGCTATTATACAGAGAAGGATGCTGCAGTTGTCGTTAGGCAGATGCTCAAGGTTGCTGCTCAGTGTCATTTACATGGTTTGGTGCACCGTGACATGAAACCTGAGAATTTTCTTTTCAAATCAGCCAAAGAAGATTCTTCGCTGAAGGCTACAGATTTCGGTTTGTCAGACTTCATAAAACCTGGAAAAAAATTTTCAGATATTGTTGGCAGTGCTTATTATGTTGCCCCTGAAGTATTAAAACGCAAGTCAGGGCCTGAATCTGATGTTTGGAGTATTGGTGTTATAACCTACATTTTACTTTGTGGCAGACGTCCATTTTGGGACAGGACTGAAGATGGTATATTCAGAGAGGTCTTAAGGAACAAGCCAGATTTCCGTAGGAAACCATGGCCCAATGTAAGCAACAGTGCTAAAGATTTTGTGAGGAAATTACTTGTAAAGGATCCTCGAGCAAGATTAACCGCTGCTCAGGCTCTATCTCACCCATGGGTTAGAGAAGGAGGAGAGGCATTAGGAATACCCATCGATATATCTGTCCTGAATAACATGCGGCAATTTGTGAAGTACAGTCGTTTGAAACAGTTTGCACTAAGGGCATTGGCTAGCACTCTTGATGAAGAAGAGTTGGCTGATCTCAAAGATCAATTTGATGCAATAGATGTAGATAAAAACGGTTCTATTAGCTTGGAGGAAATGAGACAAGCCTTAGCCAAAGATCTGCCTTGGAAGTTGAAGGATTCACGTGTTCTAGAGATTTTGCAAGCGATAGACACCAACACAGACGGGCTGGTGGATTTCCAGGAATTTGTTGCCGCTACATTGCATGTGCATCAGTTGGAGGAACATGATTCTTCAAAATGGCGCCAGCGTTCACAGGCTGCTTTTGGGAAATTTGACTTAGATAAAGATGGTTATATTACACCAGAAGAACTTAGAATGCACACAGGCATGCGGGGATCCATTGATCCACTACTTGAGGAAGCTGATATTGATAACGATGGAAAGATAAGCCTGTCGGAATTCCGTAGGCTTCTGCGAACTGCTAGCATGAATGCTCCAAGCCCAAGGTCAACCCGTGATGCACGAATATGA 1683 0.4296 MGICLSSIKVSGSNSNNTKTSTGVEKRKKQRKAQSSSSKNKPFIQGRRTINVAHKTQQQTQSKSTPQTRNKDRLTSRRKYGAIACGKRTDFGYDKDFHKRYTLGKLLGHGQFGFTYVATDKTNGDRVAVKRIDKNKMLLPIAVEDVKREVKILRELTGHENVVQFYNAYEDNSYVYIVMELCEGGELLDRILAKKDSYYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFSDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDRTEDGIFREVLRNKPDFRRKPWPNVSNSAKDFVRKLLVKDPRARLTAAQALSHPWVREGGEALGIPIDISVLNNMRQFVKYSRLKQFALRALASTLDEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKDSRVLEILQAIDTNTDGLVDFQEFVAATLHVHQLEEHDSSKWRQRSQAAFGKFDLDKDGYITPEELRMHTGMRGSIDPLLEEADIDNDGKISLSEFRRLLRTASMNAPSPRSTRDARI* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00249 560 CDD EFh 408 469 IPR002048 GO:0005509
Pte11g00249 560 Gene3D Transferase(Phosphotransferase) domain 1 187 372 - -
Pte11g00249 560 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Pte11g00249 560 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Pte11g00249 560 Gene3D Phosphorylase Kinase; domain 1 94 186 - -
Pte11g00249 560 SMART efh_1 445 473 IPR002048 GO:0005509
Pte11g00249 560 SMART efh_1 517 545 IPR002048 GO:0005509
Pte11g00249 560 SMART efh_1 408 436 IPR002048 GO:0005509
Pte11g00249 560 SMART efh_1 487 515 IPR002048 GO:0005509
Pte11g00249 560 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Pte11g00249 560 FunFam CDPK-related kinase 1 94 186 - -
Pte11g00249 560 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Pte11g00249 560 Pfam EF-hand domain pair 408 470 IPR002048 GO:0005509
Pte11g00249 560 Pfam EF-hand domain pair 489 542 IPR002048 GO:0005509
Pte11g00249 560 Gene3D - 378 541 - -
Pte11g00249 560 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 535 - -
Pte11g00249 560 SUPERFAMILY Protein kinase-like (PK-like) 97 362 IPR011009 -
Pte11g00249 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Pte11g00249 560 MobiDBLite consensus disorder prediction 1 79 - -
Pte11g00249 560 CDD EFh 489 543 IPR002048 GO:0005509
Pte11g00249 560 Pfam Protein kinase domain 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00249 560 MobiDBLite consensus disorder prediction 36 69 - -
Pte11g00249 560 ProSiteProfiles EF-hand calcium-binding domain profile. 521 548 IPR002048 GO:0005509
Pte11g00249 560 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Pte11g00249 560 Gene3D - 402 471 - -
Pte11g00249 560 FunFam calcium-dependent protein kinase 28-like 187 380 - -
Pte11g00249 560 SUPERFAMILY EF-hand 390 544 IPR011992 -
Pte11g00249 560 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Pte11g00249 560 FunFam Calcium-dependent protein kinase 28 402 471 - -
Pte11g00249 560 CDD STKc_CAMK 100 360 - -
Pte11g00249 560 SMART serkin_6 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00249 560 MobiDBLite consensus disorder prediction 7 21 - -
Pte11g00249 560 ProSitePatterns EF-hand calcium-binding domain. 526 538 IPR018247 -
Pte11g00249 560 ProSiteProfiles Protein kinase domain profile. 101 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g00249 560 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00249 Pte-Chr11 2717713 2722061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00249 1 554 EF-hand Containing Proteins AT2G17890 75.936 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte11g00249 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00249 K13412 - qsa:O6P43_033613 891.338