Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00242 ATGGGTACAAACCCATTACTAAACAGCATGTTTGATTGGAAAAAGGGTTTTTCCAACTGTAGGAAAGGAAGCACTGAGCCAAGCAGTCAGAGAGTTTTTGGCAGAGATGTGGAAAAAGAAGAATTCCAGTATGGAAGTACGCATTGCCTTTCCTCATACTACAGCGTCTTCGTGGTTCGTCTTGCTATTATGGCCATGCTAGCCATCTTAATTGGAATGCTGACCTTACTAACATGGCATTTTACCAAAATATATACAACAAAATCACTTAATAGCTTAGCATACGGCCTTCGTTATGAACTTCTACAACGCCCTGTCCTGCGAATGTGGAGCATATTGAATTCTACTTCTGAAATCACAAAAACGCAAGTAAAGCTTACTGAGTACGTGATCAGACGGTATGACAAGCCCACTTCTCAAGCAGAACAAGTTGAGCTGTATGAAGCAATGAAGGCACTGACATGGGGGTTGTTCGCTAGCCGCCAAGCTCTTTTTGCAATAACTATTAATTACAAGAATGGTTTTGTCCAGGCGTTCCATAGAGATCTCAGGAGTAGTAATACGTTCTACATTTACTCTGATCTCGCAAATTATTCTATTAGTGCCACCGGAACATATGAGATTGATTCACTGTCAGCACGCCAAGGGTGGCATGACAGAGCTGTTCATGGTAACCTTTCTGCAATTTGGTACCGCCAGCCGCTCGACCCTATCACTGGTGAGAAAATTGGAAAGGCCAGGCCAATCCCACCGGATGATTTGATCAATATTGCAGGCCTTACTCAAGTGCCTGATGGAGCAGCTTCATGGCATGTAACAGTGAGTAAATACACAGATTCACCATTACTTTCGGCAGCACTGCCAGTTTGGGACCCTTCAAATAAGAGTATAGTGGCTGTTGTTGGTGTTACTACAGCACTATATAGCGTAGGCCAGTTGATGAAAGAACTTGTTGAGTATCACAGCGGGCATATCTATCTGACATCTCAAGAGGGTTACTTGCTTGCAACTTCTACGAATGGTCCCTTATTAACAAACACATCAAAAGGGCCTGAGCTTATGATGCCAACTGATTTTGAGGATAGTACAATAAGGCTGGGGGCTGAGTGGTTGAAAAGTAAATATGGAGACAAGTTTCCTCTAACACAGGAAGTGCATGCAGAGAATGTCAAGCTAGGCCGTGAAAAGTATTACATAGACTCCTTCTTTCTAAAACTCAAGAGACTCCCTCTGGTAGGAGTGATCATCATACCGAGAAAGTACATCATGGGAAAGGTGGATGAGAGAACCTTCAAAACATTGTTGATATTGATTTCTGCATCTTTGTGTATTCTAGTCATTGGGTGTGTCTGTATTTTAATACTAACAAATGGGGTATCAAAGGAAATGAGACTGAGAGCAGAACTAATCAGTCAACTTGATGCAAGACGAAGGGCAGAGGCATCAAGCAACTACAAAAGCCAATTTTTGGCAAATATGAGTCATGAGCTAAGGACTCCTATGGCTGCAGTGATCGGGTTGCTTGACATCCTCATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAGATCAGAAAATGCTCCACAGCTTTACTCCGTCTTCTTAACAACATCTTGGATCTAAGCAAAGTCGAATCTGGAAAACTGGTGCTAGAAGATGCAGAGTTTGACTTGGGACGTGAACTTGAAGGAATTGTTGATATGTTTTCAGTGCAATGCATCAACCATAATGTCGAGACGGTTCTAGATCTCTCGGATGACATGCCAAAATTGGTTCAAGGGGATTCTGCCAGAGTTGTTCAAATATTTGCGAATCTGATCAGCAATTCTATCAAATTTACCACAACGGGTCACATTATTGTGCGTGGATGGTGTGAGAACCCAAGTTCTGCCACCGATAATAGGAAGTTCCTCCTTGATCAGAAGAAAACACGGTCGGCACAGAAGACTAAAGTGAAGCAACATGGAAACCCTACGAAGAAGGCACCTGAGAAAGACAATAAAATGATTCTTTGGTTTGAAGTTGATGACACTGGCTGCGGTATTGATCCAAGCAAATGGGACACAGTGTTTGAAAGCTTCGAGCAAGCTGATCCCTCTACCACTCGGACATACGGAGGGACTGGTCTTGGACTGTGCATTGTACGAACCTTGGTCAATAAGATGGGTGGAGAAATCAAGATTGTCAAAAAGGAGGGTCCAGGAACCTTAATGCAACTGTTCCTAGTTCTCAGTGCACCAGGGGACAGTGGACAACATTGTCAAGTGGATTATGGAAAGAATAGTTTAGTGGTGTTGCTTGCACTACAAGGCAACATGAGTAGATCAGTGACATCCAAGTGGCTACAGAAAAACGGTGTATTCACTTTAGAAGCATCTGAATGGAATGAACTGACACAAATTCTGAGGCAACTGTTCCGTGCCATCCATGCCGGAAATGAAGACCATAATGACTTTGATGTGCATTATTCAGTCAATGAAAATTTGAAAAGAAAATTGCTCAGCATACAAGAAGTGAGGAATCCAGCGTTTGTCATCCTTGTCGACATTGGGCTACTTGACTTGAGCACAGATATATGGAAGGAGCAGCTTAATTTCCTAAACAAGTATTCTGGGAAAGCCAAATTTGCATGGATGCTAAACCATGATACCTCCAATAACATAAAGATGGACCTTCGTAGAAAAGGGCATGTATTGATGGTCAACAAACCACTATACAAGGCGAAAATGGTTCATATTTTGGAAGCTGTGATAAAGGAAAGAAATCAGGAACTGCTGAAGAACAACATGACTGTGCCTGGAAATACGCTTACAGAGGGCGATCTGTTTGATTGTCTTGACAATGATCCGGCTTTTGATACTGCTAGTTCTGACGATTCTGACATGGGTAGTACTAACTCAGTTGGCACTTTTCATGGCAGAAACAAAGCTGAGAGAACTGCGAAATCTTGTTCAGGATCACAATGCCAGACAATAAAGAACTGCTTAGTTGAATTAAGCAGTGAATTTTCAAAGGATGATGACAGTGAAAATCCATGTCAAAAGAAGTGCAACTTGCAAAACATTCAGGATGAACAAGAAGAATGGAAGTCCAGCGGGCAAGTATTCGGTGATCAGACGAATAAACAATATGAGATTGGAAGACAAAATGTCAGTGCGAATAGGTCATATACAATCGAAGTAAGGGATGAAAAGAAATCTCTTGAAGGTGTTCGTATACTTCTTGCAGAAGATACGCCAGTACTTCAAAGAGTGGCAACCATCATGCTGGAGAAAATGGGTGCCACAGTTGTTGCTGTAGGTGATGGACAACAGGCAGTGGATGCTCTAAACTGCATGTTTAGTGCTGAAGATAGAAGTGAAAGTCATCGCACAGAGACAAACAACAACTCTCAAACTGAAATTTTCACTTCTCCCACATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTACGAAGCAACCAAAGCTATCAGGAAGAAGGAAGTGGGAACAGATCTGCACATCCCAATTGTTGCTCTCACTGCGCATGCAATGTCATCCGATGAAACCAAATGCTTAGGGGTGGGGATGGATGCTTATTTAACCAAGCCAATTGACTACAAGCTCATGGTGTCCACCATTCTCTCGCTCACCAAGAGACCAGCTTAG 3675 0.4231 MGTNPLLNSMFDWKKGFSNCRKGSTEPSSQRVFGRDVEKEEFQYGSTHCLSSYYSVFVVRLAIMAMLAILIGMLTLLTWHFTKIYTTKSLNSLAYGLRYELLQRPVLRMWSILNSTSEITKTQVKLTEYVIRRYDKPTSQAEQVELYEAMKALTWGLFASRQALFAITINYKNGFVQAFHRDLRSSNTFYIYSDLANYSISATGTYEIDSLSARQGWHDRAVHGNLSAIWYRQPLDPITGEKIGKARPIPPDDLINIAGLTQVPDGAASWHVTVSKYTDSPLLSAALPVWDPSNKSIVAVVGVTTALYSVGQLMKELVEYHSGHIYLTSQEGYLLATSTNGPLLTNTSKGPELMMPTDFEDSTIRLGAEWLKSKYGDKFPLTQEVHAENVKLGREKYYIDSFFLKLKRLPLVGVIIIPRKYIMGKVDERTFKTLLILISASLCILVIGCVCILILTNGVSKEMRLRAELISQLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGIVDMFSVQCINHNVETVLDLSDDMPKLVQGDSARVVQIFANLISNSIKFTTTGHIIVRGWCENPSSATDNRKFLLDQKKTRSAQKTKVKQHGNPTKKAPEKDNKMILWFEVDDTGCGIDPSKWDTVFESFEQADPSTTRTYGGTGLGLCIVRTLVNKMGGEIKIVKKEGPGTLMQLFLVLSAPGDSGQHCQVDYGKNSLVVLLALQGNMSRSVTSKWLQKNGVFTLEASEWNELTQILRQLFRAIHAGNEDHNDFDVHYSVNENLKRKLLSIQEVRNPAFVILVDIGLLDLSTDIWKEQLNFLNKYSGKAKFAWMLNHDTSNNIKMDLRRKGHVLMVNKPLYKAKMVHILEAVIKERNQELLKNNMTVPGNTLTEGDLFDCLDNDPAFDTASSDDSDMGSTNSVGTFHGRNKAERTAKSCSGSQCQTIKNCLVELSSEFSKDDDSENPCQKKCNLQNIQDEQEEWKSSGQVFGDQTNKQYEIGRQNVSANRSYTIEVRDEKKSLEGVRILLAEDTPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMFSAEDRSESHRTETNNNSQTEIFTSPTYDLILMDCQMPKMDGYEATKAIRKKEVGTDLHIPIVALTAHAMSSDETKCLGVGMDAYLTKPIDYKLMVSTILSLTKRPA* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00242 1224 PRINTS Bacterial sensor protein C-terminal signature 693 703 IPR004358 GO:0016310|GO:0016772
Pte11g00242 1224 PRINTS Bacterial sensor protein C-terminal signature 710 728 IPR004358 GO:0016310|GO:0016772
Pte11g00242 1224 PRINTS Bacterial sensor protein C-terminal signature 675 689 IPR004358 GO:0016310|GO:0016772
Pte11g00242 1224 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 748 IPR003594 -
Pte11g00242 1224 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 540 746 IPR036890 -
Pte11g00242 1224 FunFam Ethylene receptor 1 551 753 - -
Pte11g00242 1224 CDD REC_hyHK_CKI1_RcsC-like 1077 1216 - -
Pte11g00242 1224 ProSiteProfiles Histidine kinase domain profile. 492 750 IPR005467 -
Pte11g00242 1224 SMART REC_2 1075 1216 IPR001789 GO:0000160
Pte11g00242 1224 SMART HisKA_10 485 551 IPR003661 GO:0000155|GO:0007165
Pte11g00242 1224 MobiDBLite consensus disorder prediction 958 978 - -
Pte11g00242 1224 CDD HisKA 486 547 IPR003661 GO:0000155|GO:0007165
Pte11g00242 1224 PANTHER TWO-COMPONENT HISTIDINE KINASE 45 754 - -
Pte11g00242 1224 ProSiteProfiles Response regulatory domain profile. 1076 1220 IPR001789 GO:0000160
Pte11g00242 1224 Pfam His Kinase A (phospho-acceptor) domain 486 551 IPR003661 GO:0000155|GO:0007165
Pte11g00242 1224 MobiDBLite consensus disorder prediction 958 977 - -
Pte11g00242 1224 Gene3D - 1054 1221 - -
Pte11g00242 1224 SMART HKATPase_4 598 750 IPR003594 -
Pte11g00242 1224 SUPERFAMILY CheY-like 1073 1221 IPR011006 -
Pte11g00242 1224 Gene3D - 473 552 - -
Pte11g00242 1224 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 473 552 IPR036097 GO:0000155|GO:0007165
Pte11g00242 1224 FunFam Histidine kinase 1-like protein 473 552 - -
Pte11g00242 1224 Gene3D - 553 750 IPR036890 -
Pte11g00242 1224 Pfam Response regulator receiver domain 1077 1214 IPR001789 GO:0000160
Pte11g00242 1224 MobiDBLite consensus disorder prediction 647 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00242 Pte-Chr11 2617027 2623048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00242 1 1224 Histidine Kinase Gene Family AT2G17820 66.532 0.0 1626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte11g00242 HATPase_c 1.1e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00242 - - qsa:O6P43_024887 1790.39