Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00221 ATGTTTGCGTCACCTTCCTCTTACGAAGTCTTCTGTTCTCTTCCCAATCTCCCACCTCCGTTGTCCACAACAAGGAAGGCCCGACCTTCACAAACCTTAAAGCTTCCTACAAGGTTCAGTATTCTGCTGTCTTCTTTGCAACACTCAAACTTAATCCAGCAAGATGATATAGATGACCATGTAATAGGTGATTGTGTTGTGTTCGAAGAAGGCATATTTGAAGATCCTTATCTCCAGGAAGAATTGAATTTGCAAAATTTTGAGGATAAGAAATCCATTCAGTCGAAATCCACCAAAAATGTCGTCAACATCGAGCCTGAAAATTTGGTTCCAGAAAAGTGGAAGGAAGTTCAAGCTCAAATCAATATTACCAAGAAGGAAAGACGCAAAATTGCTCAGGAAATTCAGTTTAACAGCAGAGTGGAGAAGAGGAAGCAAGGACTTGTTCCTTTGAGGCATTTGAATCTAGAGGAGTATATGGCATATAAGGAAGCAAAGTTGGCTCAGGAGAAATTATTTATGCTGGATAACCCTACACGTTTTCCTGTGGAAGATAAGGTGGAGGGAGAGAACGATGGTGAGTCAAACGAAGGGTCTCTGAATGAGCGTGTGGCGCCTAAGAATCCCAGGTGGCAAGTTTACGGAAGAGGTTTAGATGATGTGACAGAGTTTTTCAACAGTGAGAACTATGACCCTAGTGCGATGAAGACCCCTGAAGCGCGACAAAGATTGTTTACGAAGGAGGAGAGGGATCTGCTCAATAAGCGGAAACCTGATCTAGCGTCTGCCACTTCGGAGAAATGGCTTCCTCTGCATACTCTCGTTACAAGTGGAGAATTTTATCTTGTTGATTCTTTGCTGAAGCATGATGTTGATATCAATGCTGCAGATAAGGATGGTCTTACTGCTCTACACAAAGCAATAATCGGAAAGAAACAGGCCATAACCAACTATCTTTTGCGGAATTCAGCTAACCCATTTGTTCGCGATAAGGATGGGGCTACTTTGATGCATTATGCTGTCCAAACAGCATCTAGTCAGGCGATTAAAGTTCTTCTTCTATATAATGTCAGCATAAACCTTCCGGACAATGACGGCTGGACACCGCTGCATCTTGCTGTTCAAACTCGAAGGACAGACTTAGTGAAGCTTCTATTAATTAAGGGAGCAGATGCCACATTAAAGAACAAGGATGGTTTGACACCACTGCAACTTTGCCTGTATTCCGGTCAAGACATAAGGACTTACGAGCTCATTAAGCTGTTGAAGAATCCTCCAAAACCTCGACCTTGGAGTGCAGTTTACCAAGGACGACATTGTTCTAAGTCTTGA 1332 0.4279 MFASPSSYEVFCSLPNLPPPLSTTRKARPSQTLKLPTRFSILLSSLQHSNLIQQDDIDDHVIGDCVVFEEGIFEDPYLQEELNLQNFEDKKSIQSKSTKNVVNIEPENLVPEKWKEVQAQINITKKERRKIAQEIQFNSRVEKRKQGLVPLRHLNLEEYMAYKEAKLAQEKLFMLDNPTRFPVEDKVEGENDGESNEGSLNERVAPKNPRWQVYGRGLDDVTEFFNSENYDPSAMKTPEARQRLFTKEERDLLNKRKPDLASATSEKWLPLHTLVTSGEFYLVDSLLKHDVDINAADKDGLTALHKAIIGKKQAITNYLLRNSANPFVRDKDGATLMHYAVQTASSQAIKVLLLYNVSINLPDNDGWTPLHLAVQTRRTDLVKLLLIKGADATLKNKDGLTPLQLCLYSGQDIRTYELIKLLKNPPKPRPWSAVYQGRHCSKS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00221 443 ProSiteProfiles Ankyrin repeat profile. 332 364 IPR002110 GO:0005515
Pte11g00221 443 Pfam Ankyrin repeats (many copies) 270 312 IPR002110 GO:0005515
Pte11g00221 443 Gene3D - 338 427 IPR036770 -
Pte11g00221 443 Gene3D - 234 337 IPR036770 -
Pte11g00221 443 SUPERFAMILY Ankyrin repeat 252 411 IPR036770 -
Pte11g00221 443 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 165 432 - -
Pte11g00221 443 SMART ANK_2a 299 328 IPR002110 GO:0005515
Pte11g00221 443 SMART ANK_2a 332 361 IPR002110 GO:0005515
Pte11g00221 443 SMART ANK_2a 398 427 IPR002110 GO:0005515
Pte11g00221 443 SMART ANK_2a 365 394 IPR002110 GO:0005515
Pte11g00221 443 SMART ANK_2a 266 295 IPR002110 GO:0005515
Pte11g00221 443 ProSiteProfiles Ankyrin repeat region circular profile. 365 397 - -
Pte11g00221 443 ProSiteProfiles Ankyrin repeat profile. 299 331 IPR002110 GO:0005515
Pte11g00221 443 ProSiteProfiles Ankyrin repeat profile. 365 397 IPR002110 GO:0005515
Pte11g00221 443 ProSiteProfiles Ankyrin repeat region circular profile. 332 364 - -
Pte11g00221 443 MobiDBLite consensus disorder prediction 183 206 - -
Pte11g00221 443 MobiDBLite consensus disorder prediction 183 197 - -
Pte11g00221 443 Pfam Ankyrin repeats (3 copies) 315 396 IPR002110 GO:0005515
Pte11g00221 443 ProSiteProfiles Ankyrin repeat profile. 266 298 IPR002110 GO:0005515
Pte11g00221 443 FunFam Ankyrin repeat domain-containing protein, chloroplastic 239 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00221 271 430 Ion Channels AT2G25600 32.716 5.90e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00221 - - pper:18769563 546.584