Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00219 ATGAATCATAGTTCTGGTTTTATTCTTCCAAAGGGGCTTGAATCAAACCGATCATCTCCAGAATGGAACAACAAGGGAGACAATTCGTGGCAGCTAATAGCAGCCAGCATGGTGTGTCTTCAAAGTGTTCCAGGTCTTGTGATTCTTTATGGTAGCATAGTTAAGAGGAAATGGGCAATCAATTCTGCCTTTATGGCTTTATATGGTTTTGCCATGGCATTGTTGTGTTGTGTTCTATGGGTCTATGGCATGGCATTTGGCAGCAAGCTCATTCCAATTGTGGGGAAGCCAAAACCCACTCTGGATGAAAATGATCTCTTAGCTCAGTTCAAAGATCGTTACTTGCCAGTAGCTGACGCCGTTTTTTACCAGTCTGCTTTTGCTGCAATCACTATTGTGCTGATTGCAGGTTCCGTGCTCGGAAGAATGAATTTCTACGCATGGATGCTCTTCGTTCCTCTTTGGTTGACATTGTCTTACTCTGTAGGTGCCTTCATCATCTGGGGTAATAGCTTCCTTTATACTATTGATTATGCTGGAGGCTTCGTCATTCATCTCTCTTCTGGTGTAGCTGGTTTCACTGCTGCTTATTGGGTGGGGCCAAGACACACACACGACCGACAACATTTTCCACCAAATAACTTGATTCACATGCTGGCGGGTGCAGGGCTGTTATGGATTGGCTGGACAGGTTTCAATGGTGGAGCACCATATGCAGTGGGTAGAGTATCATCTTTGGCTATCCTCAACACCCATCTCTGCACTGCCACTAGTCTCTTGGTCTGGCTTTTCCTGGATATGATTGCATACAAGAAAAGTTCTGTGATTGGTGCAGTCCAGGGAATGATGACAGGCCTCGTATGTATCACACCAGGTGCAGGATTGGTGAACACATGGGCTGCAGCACTGATGGGAGTCTTTTCTGGTTCAGTGCCATGGTACACAATGATGGTTCTGCACAGGAAATCTGCATTCTTCCAAAGTGTGGATGACACGCTAGGGGTCTTCCACACTCATGCTGTGGCAGGTGTACTAGGTGGAATTCTGTCTGGTTTGTTTGCAGAACCCAGCCTTTTGAGGATGATGTATGGTAAAAATATGCCATACGGACCAGGCATGTTCTATAGCTTTGTTCCTGGACAACTTATTCGCGGCCTTAAGCAAATGGGCAATCAGCTGATTGGTGCAGCTCTAATTGCTATATGGAATGTGGTGATTACAAGTTTCATATGTATTATCATCAACCGAATCGTGAATCTAAGGATGAAAGAAGAGGACCTAGAGATTGGCGATGATGCTATTCATGGAGAAGATGCCTACGCATTGTGGGGAGATGGAGAACGTAGAGAGGGTAGCATTTTCTCCTATCTTCCCTAA 1377 0.4524 MNHSSGFILPKGLESNRSSPEWNNKGDNSWQLIAASMVCLQSVPGLVILYGSIVKRKWAINSAFMALYGFAMALLCCVLWVYGMAFGSKLIPIVGKPKPTLDENDLLAQFKDRYLPVADAVFYQSAFAAITIVLIAGSVLGRMNFYAWMLFVPLWLTLSYSVGAFIIWGNSFLYTIDYAGGFVIHLSSGVAGFTAAYWVGPRHTHDRQHFPPNNLIHMLAGAGLLWIGWTGFNGGAPYAVGRVSSLAILNTHLCTATSLLVWLFLDMIAYKKSSVIGAVQGMMTGLVCITPGAGLVNTWAAALMGVFSGSVPWYTMMVLHRKSAFFQSVDDTLGVFHTHAVAGVLGGILSGLFAEPSLLRMMYGKNMPYGPGMFYSFVPGQLIRGLKQMGNQLIGAALIAIWNVVITSFICIIINRIVNLRMKEEDLEIGDDAIHGEDAYALWGDGERREGSIFSYLP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00219 458 Gene3D Ammonium transporter AmtB like domains 10 443 IPR029020 -
Pte11g00219 458 SUPERFAMILY Ammonium transporter 22 422 - -
Pte11g00219 458 ProSitePatterns Ammonium transporters signature. 177 202 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pte11g00219 458 MobiDBLite consensus disorder prediction 1 22 - -
Pte11g00219 458 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Pte11g00219 458 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Pte11g00219 458 PRINTS Rhesus blood group protein signature 124 140 IPR002229 GO:0005886
Pte11g00219 458 PANTHER AMMONIUM TRANSPORTER MEP2 13 450 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte11g00219 458 NCBIfam ammonium transporter 27 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pte11g00219 458 Pfam Ammonium Transporter Family 30 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00219 Pte-Chr11 2474364 2476059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00219 117 452 Inorganic Solute Cotransporters AT2G38290 61.357 2.98e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00219 K03320 - cave:132185453 684.485