LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g00216	ATGGCCATGCTAAAAGACATTGAATTTGGAGAACCGCGACAAGGTGGATTGGCTGCTAAAGACTATCAAGACCCACCACCCGCCCCACTGATCGACACAGAAGAATTAGCTCAGTGGTCATTTTACAGGGCCATTATTGCTGAGTTCGTAGCCACACTCTTGTTTTTGTATATTACAGTCTTCACTGTGATTGGTTACAAGAGCCAGGCTGACACAAAAGCTTGCGGTGACCAATGTGGTGGAGTTGGCGTCCTTGGCATCGCTTGGACCTTTGGTGGCATGATCTTCATCCTCGTCTACTGCACTGCTGGCATATCTGGAGGGCACATCAACCCTGCGGTGACATTTGGCTTGTTCTTGGCACAGAAGGTGTCTTTGGTTAGAGCTCTTCTGTACATGCTTGCTCAGTGCTTGGGTGCCATACTTGGGTGTGGATTAGTGAAGGCTTTCCAGAGGGAATACTACATTACATACGGTGGTGCTGCCAACGAACTTGCTCGTGGATTCAGCATAGGCACAGGGTTGGGAGCTGAGATCATGGGTACCTTTGTTCTCGTCTACACTGTCTTCTCTGCTACTGATCCAAAAAGAAATGCCAGGGATCCAGCATAG	612	0.4886	MAMLKDIEFGEPRQGGLAAKDYQDPPPAPLIDTEELAQWSFYRAIIAEFVATLLFLYITVFTVIGYKSQADTKACGDQCGGVGVLGIAWTFGGMIFILVYCTAGISGGHINPAVTFGLFLAQKVSLVRALLYMLAQCLGAILGCGLVKAFQREYYITYGGAANELARGFSIGTGLGAEIMGTFVLVYTVFSATDPKRNARDPA*	204

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte11g00216	203	Gene3D	Glycerol uptake facilitator protein.	28	203	IPR023271	-
	Pte11g00216	203	Pfam	Major intrinsic protein	36	200	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte11g00216	203	PRINTS	Major intrinsic protein family signature	43	62	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte11g00216	203	PRINTS	Major intrinsic protein family signature	128	147	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte11g00216	203	PRINTS	Major intrinsic protein family signature	91	115	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte11g00216	203	PRINTS	Major intrinsic protein family signature	177	195	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Pte11g00216	203	PANTHER	AQUAPORIN OR AQUAGLYCEROPORIN RELATED	18	201	IPR034294	-
	Pte11g00216	203	SUPERFAMILY	Aquaporin-like	35	199	IPR023271	-
	Pte11g00216	203	ProSitePatterns	MIP family signature.	109	117	IPR022357	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g00216	Pte-Chr11	2418897	2419634	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g00216	1	201	Major Intrinsic Protein MIP	AT2G37170	74.627	2.70e-106	306

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g00216	K09872		-	cave:132192267	330.102