Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00210 ATGCTTCTTGACCAAAATTCCATAGACGAAACACATTATGAGATTCTTAATGTTAAGGAAGATGCAAGCTATGAAGAAATTCGAGCTAGATACAAAACCGCTTTGCTCAATTCACATCCTGATAAAATGCCAAATAATTGTGAGAACTCCGACTGTGATCAAGAGTTTGGAGGTAGATTCTTTAAAGTGCAGAAGGCATGGGAAGTACTTGGGGATGCAAGATCGCGTGCAGTATATGATCGCGAGCTTCTGGGGTCAAGGCAGGATACTGCGATTGCAGAAGCTGCAGAAGACTTGTGCTTGGTCGACATGATGGCTGAAGATGATGGAAAAGCTATTGAGCTGTTTTACCAGTGCAGATGTGGTGATCACTTCTGCGTAGACTCGTTGGAGTTGGGTAAAATGGGATATTCAGTATGGATGGATGGAACCAAGATCTCTGTACAGGCTGAAGATACTCTACCAGCTTCAATCCTACTTCCTTGTGGATCTTGCTCGCTCAAAGCCCGTCTTTTAATCAACTCAGATTGTATTAACTCCGGGAAAACCACATTTGATTAA 561 0.426 MLLDQNSIDETHYEILNVKEDASYEEIRARYKTALLNSHPDKMPNNCENSDCDQEFGGRFFKVQKAWEVLGDARSRAVYDRELLGSRQDTAIAEAAEDLCLVDMMAEDDGKAIELFYQCRCGDHFCVDSLELGKMGYSVWMDGTKISVQAEDTLPASILLPCGSCSLKARLLINSDCINSGKTTFD* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00210 186 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Pte11g00210 186 Gene3D DnaJ domain 2 86 IPR036869 -
Pte11g00210 186 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Pte11g00210 186 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Pte11g00210 186 Pfam DnaJ domain 11 80 IPR001623 -
Pte11g00210 186 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Pte11g00210 186 PANTHER DPH3 HOMOLOG-RELATED 11 175 IPR044248 GO:0017183|GO:0046872
Pte11g00210 186 Pfam CSL zinc finger 102 172 IPR007872 -
Pte11g00210 186 Gene3D DPH Zinc finger 87 184 IPR036671 -
Pte11g00210 186 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pte11g00210 186 PRINTS DnaJ domain signature 55 75 IPR001623 -
Pte11g00210 186 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pte11g00210 186 SMART dnaj_3 10 75 IPR001623 -
Pte11g00210 186 SUPERFAMILY CSL zinc finger 98 176 IPR036671 -
Pte11g00210 186 CDD DnaJ 11 72 IPR001623 -
Pte11g00210 186 FunFam DNAJ heat shock N-terminal domain-containing protein-like 87 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00210 Pte-Chr11 2398557 2400400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00210 12 80 C2H2 Transcription Factor Family AT1G74250 37.681 1.13e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00210 K17867 - vvi:100258040 238.039