Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00208 ATGGGAAGAAAGTTTGGACAGGATATCATGAACAATAGGAGTGTATGGAGCGTGATGAATCAGGGTTTATCTGGAGGTCAACATGACCTTTGTCATGCCAATAAGAGGGGTTTGTCAGGAAAACAAGAGTTCTATGAAAAGAAGCAAGCAGATCCAGTTGGTCGACCAATCACCAGGAGGTTTGCTGCAAAAATTGCTAGCACACAATCCCACATTGAGGAAATCAAGAAGTCAAATGCACCATTGTCGAACACAAATGTGTTTGGGAATTGTATATTCATTGATGAAGAATACAAATTAACCCCAGAACAGCCAGAGCCTATGTTTTTAGAAGATACAGAAGCGACGTCTAATGGGCTTGATCAGATGGAGGAAGTTGAGATGGAAGATATATTCGAAGAGCCTGTTATGGATATAGATGGATGTGATGCAAATAACCCACTTGCAGTTGTTGATTATGTAGAAGACCTTTACGCCTACTACAGAAAAATAGAGAGTAGTAGCTGTATCTCACCAAATTACATGGCACATCAATTCGATATTAATGAGAAGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCATGACAAGTTTGAACTTATGAACGAGACTCTCTATCTTACAGTAAACCTGATAGATAGATTTTTAGCACAGCAGACGGTTGCAAGGAAGAAGCTTCAGCTGGTAGGTTTGGTTGCTATGCTTTTGGCATGCAAATATGAAGAAGTTTCTGTTCCTGTAGTTGGTGATCTAATTCTAATATCGGATAAAGCTTACACGAGAAAGGAAGTCCTGGAAATGGAGAAGTTGATGCTTAAGACACTGCAGTTTAATATGTCCGTTCCAACACCACATGTTTTCATGCAAAGATTCTTGAAAGCAGCTCAAGCTGATAGGAAGCTGGAGCTCCTATCGTTCTACTTGATAGAGCTTTCTTTAGTGGAGTATGAGATGCTAAAGTTTCCACCATCCTTGCTAGCTTCAGCCGCAGTTTATACTGCTCAGTGTACCATTGGCTGTTCTACACAGTGGAGTAGGACTTGTGAATGGCATACCAACTATTCAGAAGAGGAGCTTTTAGAATGCTCGAGGCTCATGGTAACCTTCCACCAGAAAGCTGGGACCGGAAAACTTACAGGGGTCTACAGGAAGTACTGCACAACAAAGTTTTCCTACACTTCAAAATTTGACCCAGCGTATTTTCTTCTGGGGGAGACTCAGACTTGA 1233 0.4136 MGRKFGQDIMNNRSVWSVMNQGLSGGQHDLCHANKRGLSGKQEFYEKKQADPVGRPITRRFAAKIASTQSHIEEIKKSNAPLSNTNVFGNCIFIDEEYKLTPEQPEPMFLEDTEATSNGLDQMEEVEMEDIFEEPVMDIDGCDANNPLAVVDYVEDLYAYYRKIESSSCISPNYMAHQFDINEKMRAILIDWLIEVHDKFELMNETLYLTVNLIDRFLAQQTVARKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMLKTLQFNMSVPTPHVFMQRFLKAAQADRKLELLSFYLIELSLVEYEMLKFPPSLLASAAVYTAQCTIGCSTQWSRTCEWHTNYSEEELLECSRLMVTFHQKAGTGKLTGVYRKYCTTKFSYTSKFDPAYFLLGETQT* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00208 410 Gene3D - 156 396 - -
Pte11g00208 410 SMART cyclin_7 288 370 IPR013763 -
Pte11g00208 410 SMART cyclin_7 191 275 IPR013763 -
Pte11g00208 410 CDD CYCLIN_AtCycB-like_rpt1 133 279 - -
Pte11g00208 410 FunFam G2/mitotic-specific cyclin-1 271 396 - -
Pte11g00208 410 Gene3D - 170 282 - -
Pte11g00208 410 Pfam Cyclin, N-terminal domain 156 282 IPR006671 -
Pte11g00208 410 SMART Cyclin_C_2 284 401 IPR004367 -
Pte11g00208 410 SUPERFAMILY Cyclin-like 283 400 IPR036915 -
Pte11g00208 410 CDD CYCLIN_AtCycB-like_rpt2 284 400 - -
Pte11g00208 410 ProSitePatterns Cyclins signature. 186 217 IPR006671 -
Pte11g00208 410 SUPERFAMILY Cyclin-like 145 281 IPR036915 -
Pte11g00208 410 PANTHER CYCLINS 114 381 IPR039361 -
Pte11g00208 410 Pfam Cyclin, C-terminal domain 284 399 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00208 Pte-Chr11 2392529 2395402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00208 13 405 Core Cell Cycle Gene Families AT1G20610 57.538 6.20e-161 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00208 K21777 - pvy:116119730 594.349